RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MYEF2Q9P2K5 600 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 CGGBP1Q9UFW8 167 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 DAPK2Q9UIK4 370 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 SLC7A11Q9UPY5 501 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 LRRK2Q5S007 2527 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 hCG_2014768A0A024R1R8 64 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 IGLV3-9A0A075B6K5 115 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 FAM230AA0A1W2PPH8 454 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 CLEC18AA5D8T8 446 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 PRF1P14222 555 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 IDNKQ5T6J7 187 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 HES5Q5TA89 166 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 CLEC18BQ6UXF7 455 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 SNX29P2Q8IUI4 249 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 CLEC18CQ8NCF0 446 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 SPSB1Q96BD6 273 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 PPP1R14BQ96C90 147 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 PLK3Q9H4B4 646 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 TMEM100Q9NV29 134 aa15.22■□□□□ 0.03
PTCHD3-202ENST00000622555 IFITM5A6NNB3 132 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 ALDOBP05062 364 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 SLC2A2P11168 524 aaPredicted RBP15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 CEACAM21Q3KPI0 293 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 LYSMD2Q8IV50 215 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 ACBD4Q8NC06 268 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 OR8S1Q8NH09 359 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 FOXRED1Q96CU9 486 aaPredicted RBP15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 BORCS8Q96FH0 119 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 GPER1Q99527 375 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 ADAT1Q9BUB4 502 aaKnown RBP15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 MSL2Q9HCI7 577 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 CISD1Q9NZ45 108 aaKnown RBP15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 TAAR3PQ9P1P4 343 aa15.21■□□□□ 0.03
PTCHD3-202ENST00000622555 PKDREJQ9NTG1 2253 aa15.21■□□□□ 0.02
PTCHD3-202ENST00000622555 AIPO00170 330 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 ZNF93P35789 620 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 FUT6P51993 359 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 DAZAP2Q15038 168 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 OR8G1Q15617 311 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 ZNF672Q499Z4 452 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 RNF144BQ7Z419 303 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 LILRB1Q8NHL6 650 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 HPSE2Q8WWQ2 592 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 OR5P3Q8WZ94 311 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 ITPKCQ96DU7 683 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SDHCQ99643 169 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SLC22A4Q9H015 551 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 METTL17Q9H7H0 456 aaPredicted RBP15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 ABCB9Q9NP78 766 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 PLSCR5A0PG75 271 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 A1L4Q6 167 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SERPINF1P36955 418 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 GPM6AP51674 278 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 MTCP1P56278 107 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 KISS1Q15726 138 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 NKPD1Q17RQ9 610 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SPANXN2Q5MJ10 180 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 Q6ZR03 302 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 LHFPL2Q6ZUX7 228 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 OR13G1Q8NGZ3 307 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 AP3S1Q92572 193 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 RFT1Q96AA3 541 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 RNF170Q96K19 258 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SORCS2Q96PQ0 1159 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SPOCK3Q9BQ16 436 aa15.2■□□□□ 0.02
PTCHD3-202ENST00000622555 SLC17A2O00624 439 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CLDN1O95832 211 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CD37P11049 281 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 APOBEC3AP31941 199 aaPredicted RBP15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 RBP2P50120 134 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 MMP15P51511 669 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 ATP1B3P54709 279 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CLDN12P56749 244 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 RAB11BQ15907 218 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 TRIM16LQ309B1 348 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CDH26Q8IXH8 852 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 OR10AD1Q8NGE0 317 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 OR5A2Q8NGI9 324 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CPNE2Q96FN4 548 aaPredicted RBP15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 DHRS9Q9BPW9 319 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 MICU1Q9BPX6 476 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 UQCC2Q9BRT2 126 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CCDC32Q9BV29 185 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 RTL8AQ9BWD3 113 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 FGF23Q9GZV9 251 aaPredicted RBP15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 MIXL1Q9H2W2 232 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 CNTD2Q9H8S5 307 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 STEAP1Q9UHE8 339 aa15.19■□□□□ 0.02
PTCHD3-202ENST00000622555 IGKV1-27A0A075B6S5 117 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 A0A0B4J203 849 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 A6NNC1 897 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 ZNF732B4DXR9 585 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 H0YL77 283 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 MLNRO43193 412 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 PFDN1O60925 122 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 HTR2CP28335 458 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 P2RY14Q15391 338 aa15.18■□□□□ 0.02
PTCHD3-202ENST00000622555 C1orf100Q5SVJ3 147 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms