RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 MOGAT3Q86VF5 341 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 CELF2-AS1Q8N7Q2 184 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR1M1Q8NGA1 313 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 RDH5Q92781 318 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 BARX1Q9HBU1 254 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 IGHV1-69-2A0A0G2JMI3 117 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR5B21A6NL26 309 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 GABRPO00591 440 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 SC5DO75845 299 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 OCMP0CE72 109 aaPredicted RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 CD36P16671 472 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 RAB3AP20336 220 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 PRKACBP22694 351 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 PMELP40967 661 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 FUT6P51993 359 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 MPPED2Q15777 294 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 CARTPTQ16568 116 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 TGIF2LYQ8IUE0 185 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 LRRC75A-AS1Q8N1F1 130 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 THRSPQ92748 146 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 RPL3LQ92901 407 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 YIPF5Q969M3 257 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 TECTBQ96PL2 329 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 GCM1Q9NP62 436 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 CACNG2Q9Y698 323 aa13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 ASH1LQ9NR48 2969 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-204ENST00000617222 APCP25054 2843 aa13.21□□□□□ -0.3
PCDHGC3-204ENST00000617222 TRAV8-7A0A075B6U6 113 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 TRDV1A0A1B0GX56 115 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 A6NLC8 198 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 TMEM210A6NLX4 147 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 SULT1B1O43704 296 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 ALX3O95076 343 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 PTBP3O95758 552 aaKnown RBP13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 TFAP2AP05549 437 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 IGFBP3P17936 291 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 CRYBB2P43320 205 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 GATA4P43694 442 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 PPP3R1P63098 170 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF154Q13106 437 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 HSD17B12Q53GQ0 312 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 FAM76BQ5HYJ3 339 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF529Q6P280 563 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF420Q8TAQ5 688 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 CCL17Q92583 94 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR51E2Q9H255 320 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 OR51I2Q9H344 312 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 EXOSC4Q9NPD3 245 aaKnown RBP13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 CKLFQ9UBR5 152 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 STUB1Q9UNE7 303 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 FOXJ3Q9UPW0 622 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 PPP1R3CQ9UQK1 317 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
PCDHGC3-204ENST00000617222 LRBAP50851 2863 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ARID1AO14497 2285 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 LRP5LA4QPB2 252 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 GPX5O75715 221 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 HCKP08631 526 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 UCHL1P09936 223 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 GADD45AP24522 165 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ALDH3B2P48448 385 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ATP1B3P54709 279 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 MTCP1P56278 107 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 MRPS11P82912 194 aaKnown RBP13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 HFEQ30201 348 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 CD200R1LQ6Q8B3 271 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ZNF525Q8N782 197 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 DNAAF1Q8NEP3 725 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 PHYHIPQ92561 330 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 SPSB1Q96BD6 273 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 YIPF6Q96EC8 236 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 DLL4Q9NR61 685 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 C1orf123Q9NWV4 160 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 DCAF16Q9NXF7 216 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 SSR3Q9UNL2 185 aa13.19□□□□□ -0.3
PCDHGC3-204ENST00000617222 CDIPTO14735 213 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 MAGEB3O15480 346 aa13.18□□□□□ -0.3
PCDHGC3-204ENST00000617222 MAS1P04201 325 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms