RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
LINC00539-204ENST00000608957 NOX4Q9NPH5 578 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF275Q9NSD4 429 aaPredicted RBP9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SNTG1Q9NSN8 517 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 TMEM160Q9NX00 188 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 HHLA2Q9UM44 414 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 DHDHQ9UQ10 334 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 N6AMT1Q9Y5N5 214 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 TRBV5-7A0A0A0MS05 114 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 A0A1B0GVI7 797 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 A0A1W2PPK0 400 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 SHISA3A0PJX4 238 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 H3BSH0 61 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 PIN1P1O15428 100 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 SYT7O43581 403 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 LMX1BO60663 402 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 ICMTO60725 284 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 CLEC2LP0C7M8 214 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 RBMXP38159 391 aaKnown RBP9.79□□□□□ -0.84
LINC00539-204ENST00000608957 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
LINC00539-204ENST00000608957 MMP15P51511 669 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 PPP1CBP62140 327 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 MXD1Q05195 221 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 LSAMPQ13449 338 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 NKPD1Q17RQ9 610 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
LINC00539-204ENST00000608957 MBNL2Q5VZF2 373 aaKnown RBP9.79□□□□□ -0.84
LINC00539-204ENST00000608957 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
LINC00539-204ENST00000608957 RDH5Q92781 318 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 TMEM106AQ96A25 262 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 SLC25A46Q96AG3 418 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 C1orf159Q96HA4 380 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 OR10A2Q9H208 303 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 SP140LQ9H930 580 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 CHODLQ9H9P2 273 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
LINC00539-204ENST00000608957 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
LINC00539-204ENST00000608957 A0A0U1RQV5 110 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 LOC100289279A0A1B0GTE1 492 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 ZSCAN5BA6NJL1 495 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 TBX1O43435 398 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CLPXO76031 633 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 IGLV3-1P01715 115 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CD2P06729 351 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CCL1P22362 96 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 ANOS1P23352 680 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 RORCP51449 518 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CCL8P80075 99 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 SNAI3Q3KNW1 292 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF718Q3SXZ3 478 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CHRFAM7AQ494W8 412 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF404Q494X3 552 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 NAA40Q86UY6 237 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 TPRA1Q86W33 373 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 COMMD2Q86X83 199 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 OR52H1Q8NGJ2 320 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 CLDND2Q8NHS1 167 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 MCFD2Q8NI22 146 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 OR51E1Q8TCB6 317 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 BARHL1Q9BZE3 327 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
LINC00539-204ENST00000608957 SLITRK2Q9H156 845 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 NARFLQ9H6Q4 476 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 GPR84Q9NQS5 396 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 NKIRAS2Q9NYR9 191 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF319Q9P2F9 582 aa9.78□□□□□ -0.84
LINC00539-204ENST00000608957 A0A1B0GTI1 187 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 C5orf63A6NC05 138 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 CDC14BO60729 498 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 TGFAP01135 160 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 IGHV1-46P01743 117 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 LCATP04180 440 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 ZNF12P17014 697 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 FSTP19883 344 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 GPR6P46095 362 aaPredicted RBP9.77□□□□□ -0.85
LINC00539-204ENST00000608957 CAV3P56539 151 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 MRPS11P82912 194 aaKnown RBP9.77□□□□□ -0.85
LINC00539-204ENST00000608957 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 FAM166AQ6J272 317 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 DOK3Q7L591 496 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 CCDC54Q8NEL0 328 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 ORAI1Q96D31 301 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 FAM71F1Q96KD3 344 aaPredicted RBP9.77□□□□□ -0.85
LINC00539-204ENST00000608957 TCF7L1Q9HCS4 588 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 EIF3KQ9UBQ5 218 aaKnown RBP9.77□□□□□ -0.85
LINC00539-204ENST00000608957 CDC42EP3Q9UKI2 254 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 KCNS2Q9ULS6 477 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 STARD10Q9Y365 291 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 A3GALT2U3KPV4 340 aa9.77□□□□□ -0.85
LINC00539-204ENST00000608957 DOCK11Q5JSL3 2073 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 PDCD5O14737 125 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 SPRY3O43610 288 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 FAM157CP0CG43 387 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 SRMP19623 302 aa9.76□□□□□ -0.85
LINC00539-204ENST00000608957 RAB3BP20337 219 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms