RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TGFBR1P36897 503 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CD200P41217 278 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 LSM3P62310 102 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 MAB21L1Q13394 359 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 MPPED2Q15777 294 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 PCGF3Q3KNV8 242 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CEACAM21Q3KPI0 293 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 HSD17B12Q53GQ0 312 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 FAM209AQ5JX71 171 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ZNF529Q6P280 563 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 SLC16A12Q6ZSM3 486 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 UTS2BQ765I0 119 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 GPR141Q7Z602 305 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 SATL1Q86VE3 508 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 TGIF2LYQ8IUE0 185 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 DNAAF1Q8NEP3 725 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 OR1M1Q8NGA1 313 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 OR5D14Q8NGL3 314 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 THRSPQ92748 146 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ITFG2Q969R8 447 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 RFT1Q96AA3 541 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 RNF170Q96K19 258 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 HIST1H2AAQ96QV6 131 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 DIRC2Q96SL1 478 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 MICU1Q9BPX6 476 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CENPOQ9BU64 300 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 RTL8AQ9BWD3 113 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 NAA50Q9GZZ1 169 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 SLC22A4Q9H015 551 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CXXC4Q9H2H0 198 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ZCCHC4Q9H5U6 513 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CXorf56Q9H5V9 222 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 RNF167Q9H6Y7 350 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 SAP30LQ9HAJ7 183 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 TXNL4BQ9NX01 149 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 TREM2Q9NZC2 230 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CKLFQ9UBR5 152 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 FBXO9Q9UK97 447 aaPredicted RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 NOP16Q9Y3C1 178 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 CACNG2Q9Y698 323 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ZANQ9Y493 2812 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ITPR3Q14573 2671 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 NAV2Q8IVL1 2488 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 TRDV1A0A1B0GX56 115 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 PQLC2LA1A4F0 135 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 OR5B21A6NL26 309 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 C3orf80F5H4A9 247 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 AIREO43918 545 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 CDC14BO60729 498 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ARL6IP5O75915 188 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 PLATP00750 562 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 MAS1P04201 325 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ERCC1P07992 297 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 HCKP08631 526 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 OCMP0CE72 109 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 ADRA2CP18825 462 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ATF1P18846 271 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 RAB3AP20336 220 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 GALP22466 123 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 DNASE1P24855 282 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 FGF9P31371 208 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 RPL5P46777 297 aaKnown RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 PTH2RP49190 550 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 SRP9P49458 86 aaKnown RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 PPP3R1P63098 170 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 HOXA4Q00056 320 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 ZNF154Q13106 437 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 TESK1Q15569 626 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 GPR107Q5VW38 600 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 CRIP3Q6Q6R5 217 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 MOGAT3Q86VF5 341 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ANGPTL5Q86XS5 388 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 CALHM1Q8IU99 346 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 OR52N4Q8NGI2 321 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 OR5A2Q8NGI9 324 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 OR5D18Q8NGL1 313 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ZNF420Q8TAQ5 688 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 SPSB1Q96BD6 273 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 PERPQ96FX8 193 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 TECTBQ96PL2 329 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 EGLN1Q9GZT9 426 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 RAB1BQ9H0U4 201 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ABCB9Q9NP78 766 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 DECR2Q9NUI1 292 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 UFSP2Q9NUQ7 469 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 ZNF701Q9NV72 531 aaPredicted RBP6.5□□□□□ -1.37
MSH6-211ENST00000606499 C14orf119Q9NWQ9 140 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 DCAF16Q9NXF7 216 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 NKIRAS2Q9NYR9 191 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 SSR3Q9UNL2 185 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 SLC7A11Q9UPY5 501 aa6.5□□□□□ -1.37
MSH6-211ENST00000606499 IGHV1-69-2A0A0G2JMI3 117 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 SMIM30A4D0T7 59 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 LRP5LA4QPB2 252 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 A6NLC8 198 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 TMEM210A6NLX4 147 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms