RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 LCATP04180 440 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ERCC1P07992 297 aaPredicted RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 OR4A8P0C604 315 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 SLC2A1P11166 492 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 IL7P13232 177 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ZNF20P17024 532 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 AZGP1P25311 298 aaKnown RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 THBS4P35443 961 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 DDOSTP39656 456 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 KLF3P57682 345 aaPredicted RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 PPP1CBP62140 327 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 IL18Q14116 193 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 RAB11BQ15907 218 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 RSPO1Q2MKA7 263 aaPredicted RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 FAM166AQ6J272 317 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ZNF529Q6P280 563 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 CDH24Q86UP0 819 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 DTX2Q86UW9 622 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 COMMD2Q86X83 199 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 SERPINA12Q8IW75 414 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 PAQR4Q8N4S7 273 aaPredicted RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 PLPP7Q8NBV4 271 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 DNAAF1Q8NEP3 725 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 OR4M1Q8NGD0 313 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 OR52H1Q8NGJ2 320 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 SYNPRQ8TBG9 265 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 SLC7A6Q92536 515 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 NEUROG1Q92886 237 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 MRPL24Q96A35 216 aaKnown RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 FGGYQ96C11 551 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 FOXRED1Q96CU9 486 aaPredicted RBP8.65□□□□□ -1.02
UPF1-213ENST00000601981 OR10A2Q9H208 303 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 OPA3Q9H6K4 179 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 LIN7BQ9HAP6 207 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 GPR84Q9NQS5 396 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ZNF319Q9P2F9 582 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ZNF391Q9UJN7 358 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 ARID1AO14497 2285 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 LOC390937A0A1W2PQ73 354 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 DHRS7CA6NNS2 312 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 LMX1BO60663 402 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 DBHP09172 617 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 CSF3P09919 207 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 DANCRP0C864 163 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 WNT5AP41221 380 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 RANBP1P43487 201 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 PITPNBP48739 271 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 CAPZA1P52907 286 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 SCN1BQ07699 218 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 P2RY14Q15391 338 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 EFNB3Q15768 340 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 ADIPOQQ15848 244 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 BAK1Q16611 211 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 C1orf100Q5SVJ3 147 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 RFPL4BQ6ZWI9 263 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 CDH26Q8IXH8 852 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 ZNF101Q8IZC7 436 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 Q8N402 240 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 POC5Q8NA72 575 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 OR1M1Q8NGA1 313 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 OR5D14Q8NGL3 314 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 OR6M1Q8NGM8 313 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 OR14K1Q8NGZ2 314 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 RAB40AQ8WXH6 277 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 C10orf35Q96D05 121 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 SLC25A38Q96DW6 304 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 ADAT3Q96EY9 351 aaPredicted RBP8.64□□□□□ -1.03
UPF1-213ENST00000601981 FAM71F1Q96KD3 344 aaPredicted RBP8.64□□□□□ -1.03
UPF1-213ENST00000601981 COX4I2Q96KJ9 171 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 C1QTNF5Q9BXJ0 243 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 ABCG5Q9H222 651 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 DYNLRB1Q9NP97 96 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
UPF1-213ENST00000601981 C14orf119Q9NWQ9 140 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 CGGBP1Q9UFW8 167 aaPredicted RBP8.64□□□□□ -1.03
UPF1-213ENST00000601981 OR5V1Q9UGF6 321 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 DUSP13Q9UII6 198 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 PLEKHA6Q9Y2H5 1048 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 V9GYS6 101 aa8.64□□□□□ -1.03
UPF1-213ENST00000601981 TACC2O95359 2948 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 A0A0G2JMP0 313 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 A0A0X1KG70 313 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 A0A1W2PQ09 198 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 PLSCR5A0PG75 271 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 XRCC2O43543 280 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 MTRF1O75570 445 aaKnown RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 DHRS3O75911 302 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 TPPPO94811 219 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 OCMP0CE72 109 aaPredicted RBP8.63□□□□□ -1.03
UPF1-213ENST00000601981 ZNF250P15622 560 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 SELEP16581 610 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 RAB3AP20336 220 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 ANOS1P23352 680 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 BDKRB2P30411 391 aa8.63□□□□□ -1.03
UPF1-213ENST00000601981 GNALP38405 381 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms