RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	OR8G1	Q15617	311 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	FAM27D1	Q5T7N8	215 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	PLCXD3	Q63HM9	321 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026		Q6ZR03	302 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	OR1M1	Q8NGA1	313 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	OR13C9	Q8NGT0	318 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	RAB2B	Q8WUD1	216 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	BCL7B	Q9BQE9	202 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	CENPO	Q9BU64	300 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	NAA50	Q9GZZ1	169 aa	Known RBP	18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	SLC7A11	Q9UPY5	501 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	OTOG	Q6ZRI0	2925 aa		18.66	■□□□□ 0.58
LTBP4-227	ENST00000600026	SMIM31	A0A1B0GVY4	71 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	SPRY3	O43610	288 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	SULT1B1	O43704	296 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	IGHV1-46	P01743	117 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	ATF1	P18846	271 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	SRM	P19623	302 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	SLC16A12	Q6ZSM3	486 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	SPERT	Q8NA61	448 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	OR8S1	Q8NH09	359 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	ZNF420	Q8TAQ5	688 aa	Predicted RBP	18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	UBASH3B	Q8TF42	649 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	ORAI1	Q96D31	301 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	ADAT1	Q9BUB4	502 aa	Known RBP	18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	CEPT1	Q9Y6K0	416 aa		18.65	■□□□□ 0.58
LTBP4-227	ENST00000600026	MAGEB3	O15480	346 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	ALX3	O95076	343 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	ERCC1	P07992	297 aa	Predicted RBP	18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	IGFBP3	P17936	291 aa	Predicted RBP	18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	PRKACB	P22694	351 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	EFNA4	P52798	201 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	MZT1	Q08AG7	82 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	DIRC2	Q96SL1	478 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	MICU1	Q9BPX6	476 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	CXXC4	Q9H2H0	198 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	PPIL3	Q9H2H8	161 aa	Known RBP	18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	BARX1	Q9HBU1	254 aa	Predicted RBP	18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	BATF3	Q9NR55	127 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	SNTG1	Q9NSN8	517 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	NKIRAS2	Q9NYR9	191 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	ZDHHC8	Q9ULC8	765 aa		18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	PRRC2A	P48634	2157 aa	Known RBP	18.64	■□□□□ 0.57
LTBP4-227	ENST00000600026	ARID1A	O14497	2285 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	TRAV1-2	A0A0B4J238	106 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	MEGF11	A6BM72	1044 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	DPPA5	A6NC42	116 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	PDCD5	O14737	125 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	NCR1	O76036	304 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	LY6H	O94772	140 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	ADH4	P08319	380 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	TNFSF4	P23510	183 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	UBE2V2	Q15819	145 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	CEACAM21	Q3KPI0	293 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	CEP78	Q5JTW2	689 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	KRTAP1-3	Q8IUG1	177 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR5A2	Q8NGI9	324 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	NEU4	Q8WWR8	484 aa	Predicted RBP	18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	RTL8A	Q9BWD3	113 aa		18.63	■□□□□ 0.57
LTBP4-227	ENST00000600026	TANC2	Q9HCD6	1990 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	TRAV8-7	A0A075B6U6	113 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	MLNR	O43193	412 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	F12	P00748	615 aa	Predicted RBP	18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	MAS1	P04201	325 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	HCK	P08631	526 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	AZGP1	P25311	298 aa	Known RBP	18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	BDKRB2	P30411	391 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	MTNR1B	P49286	362 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	FUT6	P51993	359 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	VBP1	P61758	197 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	CTF1	Q16619	201 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	PCGF3	Q3KNV8	242 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026		Q5PR19	223 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	ASPHD2	Q6ICH7	369 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	ZNF529	Q6P280	563 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR2Z1	Q8NG97	314 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR5P3	Q8WZ94	311 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	SPSB1	Q96BD6	273 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	ISOC1	Q96CN7	298 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	ITPKC	Q96DU7	683 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	ELMOD3	Q96FG2	381 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	BORCS8	Q96FH0	119 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	RNF167	Q9H6Y7	350 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	TMEM138	Q9NPI0	162 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	C14orf119	Q9NWQ9	140 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026	C2CD3	Q4AC94	2353 aa		18.62	■□□□□ 0.57
LTBP4-227	ENST00000600026		A0A1B0GWJ7	208 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR5B21	A6NL26	309 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026		H0YL77	283 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	SSX4	O60224	188 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	HPX	P02790	462 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	CCL8	P80075	99 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	FAM209A	Q5JX71	171 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	TPRA1	Q86W33	373 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	DNAAF1	Q8NEP3	725 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	OR10AD1	Q8NGE0	317 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	TRMT10A	Q8TBZ6	339 aa	Known RBP	18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	NPRL2	Q8WTW4	380 aa		18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	DVL3	Q92997	716 aa	Predicted RBP	18.61	■□□□□ 0.57
LTBP4-227	ENST00000600026	CPNE2	Q96FN4	548 aa	Predicted RBP	18.61	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms