RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 SHISA3A0PJX4 238 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 PTBP3O95758 552 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 PAX1P15863 534 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 TNFSF4P23510 183 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 AZGP1P25311 298 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 PMELP40967 661 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 RPL5P46777 297 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 MPPED2Q15777 294 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 HSD17B12Q53GQ0 312 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 C22orf42Q6IC83 251 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 LRRTM1Q86UE6 522 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 SPERTQ8NA61 448 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 OR5A2Q8NGI9 324 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 SPACA5Q96QH8 159 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 HIST1H2AAQ96QV6 131 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 NKX3-1Q99801 234 aaPredicted RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 NAA50Q9GZZ1 169 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 SAP30LQ9HAJ7 183 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 EXOSC4Q9NPD3 245 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 TXNL4BQ9NX01 149 aaKnown RBP16.94■□□□□ 0.3
DNMT1-216ENST00000588952 TREM2Q9NZC2 230 aa16.94■□□□□ 0.3
DNMT1-216ENST00000588952 CHD3Q12873 2000 aaKnown RBP16.93■□□□□ 0.3
DNMT1-216ENST00000588952 FAM230AA0A1W2PPH8 454 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 LYNX1G3V0Z9 82 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 TPD52L2O43399 206 aaKnown RBP16.93■□□□□ 0.3
DNMT1-216ENST00000588952 ALX3O95076 343 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 GRPP07492 148 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 LYNX1P0DP58 116 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 ADRA2CP18825 462 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 RAB3AP20336 220 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 GALP22466 123 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 DNASE1P24855 282 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 PTH2RP49190 550 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 SRP9P49458 86 aaKnown RBP16.93■□□□□ 0.3
DNMT1-216ENST00000588952 ZNF154Q13106 437 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 CNN3Q15417 329 aaKnown RBP16.93■□□□□ 0.3
DNMT1-216ENST00000588952 TESK1Q15569 626 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 GPR141Q7Z602 305 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 CDH24Q86UP0 819 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 SATL1Q86VE3 508 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 C11orf53Q8IXP5 236 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 OR52N4Q8NGI2 321 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 NEU4Q8WWR8 484 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-216ENST00000588952 THRSPQ92748 146 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 YIPF5Q969M3 257 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 PERPQ96FX8 193 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 CENPOQ9BU64 300 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 OR51I2Q9H344 312 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 DECR2Q9NUI1 292 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 UFSP2Q9NUQ7 469 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 DCAF16Q9NXF7 216 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 FOXJ3Q9UPW0 622 aa16.93■□□□□ 0.3
DNMT1-216ENST00000588952 PDZD2O15018 2839 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 LOC100506127A0A0U1RQW1 187 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 OR5B21A6NL26 309 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 CALRP27797 417 aaKnown RBP16.92■□□□□ 0.3
DNMT1-216ENST00000588952 FGF9P31371 208 aaPredicted RBP16.92■□□□□ 0.3
DNMT1-216ENST00000588952 TGFBR1P36897 503 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 EFNA4P52798 201 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 GNG3P63215 75 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 HOXA4Q00056 320 aaPredicted RBP16.92■□□□□ 0.3
DNMT1-216ENST00000588952 DEFB113Q30KQ7 82 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 FAM76BQ5HYJ3 339 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 SLC16A12Q6ZSM3 486 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 MOGAT3Q86VF5 341 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 CELF2-AS1Q8N7Q2 184 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 ZNF420Q8TAQ5 688 aaPredicted RBP16.92■□□□□ 0.3
DNMT1-216ENST00000588952 PHYHIPQ92561 330 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 TECTBQ96PL2 329 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 GSX2Q9BZM3 304 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 EGLN1Q9GZT9 426 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 GCM1Q9NP62 436 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 C14orf119Q9NWQ9 140 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 SSR3Q9UNL2 185 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 SLC7A11Q9UPY5 501 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 ITPR2Q14571 2701 aa16.92■□□□□ 0.3
DNMT1-216ENST00000588952 CDC14BO60729 498 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 F12P00748 615 aaPredicted RBP16.91■□□□□ 0.3
DNMT1-216ENST00000588952 MAS1P04201 325 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 PRKACBP22694 351 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 COL8A2P25067 703 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 GATA4P43694 442 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 FUT6P51993 359 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 ATP5J2P56134 94 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 PPP3R1P63098 170 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 GPR107Q5VW38 600 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 ZNF826PQ6ZT77 177 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 ANGPTL5Q86XS5 388 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 CALHM1Q8IU99 346 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 DNAAF1Q8NEP3 725 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 NINJ1Q92982 152 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 RFT1Q96AA3 541 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 SPSB1Q96BD6 273 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 MBD6Q96DN6 1003 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 GFI1Q99684 422 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 TLNRD1Q9H1K6 362 aa16.91■□□□□ 0.3
DNMT1-216ENST00000588952 BEX4Q9NWD9 120 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms