RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 KRT74Q7RTS7 529 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 PEG10Q86TG7 708 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 SERPINA12Q8IW75 414 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 OR5D14Q8NGL3 314 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 ZNF420Q8TAQ5 688 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 NPRL2Q8WTW4 380 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 THRSPQ92748 146 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 HPS1Q92902 700 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 ERGIC1Q969X5 290 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 OPALINQ96PE5 141 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 PIMREGQ9BSJ6 248 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 ZCCHC4Q9H5U6 513 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 ZNF696Q9H7X3 374 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 LOC100289279A0A1B0GTE1 492 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TRIM64A6NGJ6 449 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 CLDN25C9JDP6 229 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 IFNL4K9M1U5 179 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 NDUFS8O00217 210 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 CPEP16870 476 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 PCMT1P22061 227 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 PRKACBP22694 351 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 THBS2P35442 1172 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 GATA4P43694 442 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM33P57088 247 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TRAM1Q15629 374 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 MPPED2Q15777 294 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 UBE2V2Q15819 145 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 UTS2BQ765I0 119 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 OR1M1Q8NGA1 313 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 OR13C9Q8NGT0 318 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 HPSE2Q8WWQ2 592 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM106AQ96A25 262 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 BORCS8Q96FH0 119 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TIMD4Q96H15 378 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 Q96MF0 132 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 OR14A2Q96R54 314 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM106BQ9NUM4 274 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 C1orf123Q9NWV4 160 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 CACNG2Q9Y698 323 aa12.27□□□□□ -0.45
NPLOC4-218ENST00000574964 TRBV5-5A0A0J9YX44 114 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 MAGEB3O15480 346 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 INMTO95050 263 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 HCKP08631 526 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 RAB3AP20336 220 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 MAPK3P27361 379 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 FUT6P51993 359 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 ATP1B3P54709 279 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 PPP3R1P63098 170 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF154Q13106 437 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 ACSM3Q53FZ2 586 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 PARP16Q8N5Y8 322 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 BOLLQ8N9W6 283 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 RPL3LQ92901 407 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 RAB1CQ92928 201 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM203Q969S6 136 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 RNF7Q9UBF6 113 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 CKLFQ9UBR5 152 aa12.26□□□□□ -0.45
NPLOC4-218ENST00000574964 YLPM1P49750 1951 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 A0A1W2PPK0 400 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 CCRL2O00421 344 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 CDIPTO14735 213 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 RP2O75695 350 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 PTBP3O95758 552 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 SLC25A16P16260 332 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 PSMA1P25786 263 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 RPS11P62280 158 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 RPS25P62851 125 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 HAGHLQ6PII5 290 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF573Q86YE8 665 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 PHC2Q8IXK0 858 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 SCCPDHQ8NBX0 429 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF671Q8TAW3 534 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 C10orf105Q8TEF2 133 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 TAS2R4Q9NYW5 299 aa12.25□□□□□ -0.45
NPLOC4-218ENST00000574964 IGHV4-30-2A0A087WSY4 118 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 PQLC2LA1A4F0 135 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 ISPDA4D126 451 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 SULT1B1O43704 296 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 CR1P17927 2039 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 GIFP27352 417 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 GABRA5P31644 462 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 TGFBR2P37173 567 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 PMELP40967 661 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 HAAOP46952 286 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms