RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ALDOBP05062 364 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 PRKACBP22694 351 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CD40LGP29965 261 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 ZNF45Q02386 682 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CLEC18BQ6UXF7 455 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 SNX29P2Q8IUI4 249 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CLEC18CQ8NCF0 446 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 OR5P3Q8WZ94 311 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 ADAT1Q9BUB4 502 aaKnown RBP20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 TMEM100Q9NV29 134 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 PLCE1Q9P212 2302 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 IGKV1-27A0A075B6S5 117 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 H0YL77 283 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 RGS5O15539 181 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 TNFSF8P32971 234 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 THBS2P35442 1172 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 MMP15P51511 669 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 SELENOVP59797 346 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 IFITM3Q01628 133 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 KISS1Q15726 138 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CEACAM21Q3KPI0 293 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CRIP3Q6Q6R5 217 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 LAX1Q8IWV1 398 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 ACBD4Q8NC06 268 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 OR10AD1Q8NGE0 317 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 BORCS8Q96FH0 119 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CEP19Q96LK0 163 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 HIST1H2AAQ96QV6 131 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 PLK3Q9H4B4 646 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 CNTD2Q9H8S5 307 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 TAAR3PQ9P1P4 343 aa20.51■□□□□ 0.87
ATPAF1-213ENST00000574428 A1L4Q6 167 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 SLC17A2O00624 439 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 MLNRO43193 412 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 GPM6AP51674 278 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 FUT6P51993 359 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 MTCP1P56278 107 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 P2RY14Q15391 338 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 ZNF672Q499Z4 452 aaPredicted RBP20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 OR4D6Q8NGJ1 314 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 OR5D18Q8NGL1 313 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 OR8S1Q8NH09 359 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 AP3S1Q92572 193 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 GPER1Q99527 375 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 CISD1Q9NZ45 108 aaKnown RBP20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 COL12A1Q99715 3063 aa20.5■□□□□ 0.87
ATPAF1-213ENST00000574428 CLDN1O95832 211 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 CD37P11049 281 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 OR8G1Q15617 311 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 RAB11BQ15907 218 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 SPANXN2Q5MJ10 180 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 FOXRED1Q96CU9 486 aaPredicted RBP20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 WDFY2Q96P53 400 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 SORCS2Q96PQ0 1159 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 NEK6Q9HC98 313 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 STEAP1Q9UHE8 339 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 PQLC2LA1A4F0 135 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 ZSCAN5BA6NJL1 495 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 PAHP00439 452 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 SNRPBP14678 240 aaKnown RBP20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 HTR2CP28335 458 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 SERPINF1P36955 418 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 OR3A4PP47883 348 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 RBP2P50120 134 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 C1orf100Q5SVJ3 147 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 FAM166AQ6J272 317 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 LHFPL2Q6ZUX7 228 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 OR6M1Q8NGM8 313 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 RNF170Q96K19 258 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 UQCC2Q9BRT2 126 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 LIN7BQ9HAP6 207 aa20.49■□□□□ 0.87
ATPAF1-213ENST00000574428 LRRK2Q5S007 2527 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 PLSCR5A0PG75 271 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 ZNF732B4DXR9 585 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 PLATP00750 562 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 ALDH3B1P43353 468 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 DAZAP2Q15038 168 aaPredicted RBP20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 NKPD1Q17RQ9 610 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 CDH26Q8IXH8 852 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 OR5A2Q8NGI9 324 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 OR13G1Q8NGZ3 307 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 MIXL1Q9H2W2 232 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 ABCB9Q9NP78 766 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 COMMD3Q9UBI1 195 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 TENM4Q6N022 2769 aa20.48■□□□□ 0.87
ATPAF1-213ENST00000574428 VSTM5A8MXK1 200 aa20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 CFPP27918 469 aa20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 ZNF671Q8TAW3 534 aa20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 SLC25A28Q96A46 364 aa20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 KCNK15Q9H427 330 aa20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 UTP20O75691 2785 aaKnown RBP20.47■□□□□ 0.87
ATPAF1-213ENST00000574428 A6NNC1 897 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 APOBEC3AP31941 199 aaPredicted RBP20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 ATP1B3P54709 279 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 ANGPTL5Q86XS5 388 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 OR2Z1Q8NG97 314 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 LGALS14Q8TCE9 139 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 KCTD12Q96CX2 325 aaKnown RBP20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 DHRS9Q9BPW9 319 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 MICU1Q9BPX6 476 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms