RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 EIF1BO60739 113 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 GPR75O95800 540 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC25A27O95847 323 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PAK4O96013 591 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 IGHV4-39P01824 125 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR9G9P0C7N8 305 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC35G6P0C7Q6 338 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 FRMD6-AS1P0C7T7 363 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PGA5P0DJD9 388 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OMGP23515 440 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 CXCR1P25024 350 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SDC4P31431 198 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PFN2P35080 140 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 CA5AP35218 305 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 EIF1P41567 113 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR1D4P47884 311 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 RAB5BP61020 215 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 NUTF2P61970 127 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 BAXQ07812 192 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PUDPQ08623 228 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 KCNJ11Q14654 390 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF169Q14929 603 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM30BQ3MIR4 351 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF585BQ52M93 769 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OGFOD2Q6N063 350 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM205Q6UW68 189 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 CHMP1BQ7LBR1 199 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PEX26Q7Z412 305 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 VRK3Q8IV63 474 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 LRRC18Q8N456 261 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 CBR4Q8N4T8 237 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 EIF4E3Q8N5X7 224 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 COX18Q8N8Q8 333 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR8J3Q8NGG0 315 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR52E2Q8NGJ4 325 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR51G1Q8NGK1 321 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 OR10G9Q8NGN4 311 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 MCFD2Q8NI22 146 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC37A2Q8TED4 501 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 LINC00476Q8WZB0 136 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM54Q969K7 222 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PPCDCQ96CD2 204 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 URB1-AS1Q96HZ7 61 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 GINS3Q9BRX5 216 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TAPBPLQ9BX59 468 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 ZSCAN16Q9H4T2 348 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 RPF2Q9H7B2 306 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 METTL17Q9H7H0 456 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 VSIRQ9H7M9 311 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 DDX31Q9H8H2 851 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TPT1P8Q9HAU6 139 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 B3GAT2Q9NPZ5 323 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM9BQ9NQ34 198 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 DNAJC27Q9NZQ0 273 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 POU2F3Q9UKI9 436 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 A0A1B0GV90 55 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 LINC01553A4QN01 128 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF587BE7ETH6 402 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MANBAO00462 879 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 GALR3O60755 368 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 FOXH1O75593 365 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 HPNP05981 417 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 CRYGDP07320 174 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SNRPCP09234 159 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PGA4P0DJD7 388 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PGA3P0DJD8 388 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SULT1A3P0DMM9 295 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SULT1A4P0DMN0 295 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 HSD17B1P14061 328 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 GNB3P16520 340 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 JUNBP17275 347 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 ATF1P18846 271 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PSMB1P20618 241 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 RCVRNP35243 200 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SERPINB5P36952 375 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 GPR6P46095 362 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 OR1E2P47887 323 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MFAP2P55001 183 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 TAS2R43P59537 309 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PSG4Q00888 419 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 DEFA6Q01524 100 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 IFITM2Q01629 132 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF91Q05481 1191 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SMAGPQ0VAQ4 97 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PMVKQ15126 192 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SMIM21Q3B7S5 101 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 NSUN5P1Q3KNT7 163 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SIRPB2Q5JXA9 342 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 LY6G5CQ5SRR4 150 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 KCTD16Q68DU8 428 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 Q6ZN92 141 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 FAM183BPQ6ZVS7 135 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MRGPRGQ86SM5 289 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 P2RY8Q86VZ1 359 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 RDH10Q8IZV5 341 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms