RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 C14orf119Q9NWQ9 140 aa18.62■□□□□ 0.57
RAB40B-207ENST00000572603 DHDHQ9UQ10 334 aa18.62■□□□□ 0.57
RAB40B-207ENST00000572603 PPP1R3CQ9UQK1 317 aa18.62■□□□□ 0.57
RAB40B-207ENST00000572603 IGKV1-9A0A0C4DH69 117 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 ZNF20P17024 532 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 SOX2P48431 317 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 DSCR9P59020 149 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 CARTPTQ16568 116 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 C11orf53Q8IXP5 236 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 PARP16Q8N5Y8 322 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 UFD1Q92890 307 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 RNF170Q96K19 258 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 TMEM106BQ9NUM4 274 aa18.61■□□□□ 0.57
RAB40B-207ENST00000572603 ABCA2Q9BZC7 2435 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 A0A096LNT2 108 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 PQLC2LA1A4F0 135 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 OR5B21A6NL26 309 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 TMEM210A6NLX4 147 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 NDUFS8O00217 210 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 GATBO75879 557 aaKnown RBP18.6■□□□□ 0.57
RAB40B-207ENST00000572603 HSMCR30P0CW71 290 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 CPEP16870 476 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 GPM6AP51674 278 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 MZT1Q08AG7 82 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 GPR50Q13585 617 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 ZNF181Q2M3W8 571 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 FAM76BQ5HYJ3 339 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 LIPKQ5VXJ0 399 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 OR5A2Q8NGI9 324 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 UFSP2Q9NUQ7 469 aa18.6■□□□□ 0.57
RAB40B-207ENST00000572603 TRIM64BA6NI03 449 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 ZNF732B4DXR9 585 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 GRPP07492 148 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 OCM2P0CE71 109 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 GNG3P63215 75 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 SSX1Q16384 188 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 HFEQ30201 348 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 Q499Y3 187 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 ZNF529Q6P280 563 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 SPNS3Q6ZMD2 512 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 ZNF826PQ6ZT77 177 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 PHC2Q8IXK0 858 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 CCL17Q92583 94 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 FCGR1BQ92637 280 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 ERGIC1Q969X5 290 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 OR14A2Q96R54 314 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 PIMREGQ9BSJ6 248 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 BPESC1Q9GZL8 116 aa18.59■□□□□ 0.57
RAB40B-207ENST00000572603 SF3B6Q9Y3B4 125 aaKnown RBP18.59■□□□□ 0.57
RAB40B-207ENST00000572603 TRBV5-7A0A0A0MS05 114 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 TRIM64CA6NLI5 447 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 SC5DO75845 299 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 ATF1P18846 271 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 HOXA4Q00056 320 aaPredicted RBP18.58■□□□□ 0.56
RAB40B-207ENST00000572603 INSL4Q14641 139 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 OR13C9Q8NGT0 318 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 NPRL2Q8WTW4 380 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 TMEM106AQ96A25 262 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 ORAI1Q96D31 301 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 TECTBQ96PL2 329 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 HIST1H2AAQ96QV6 131 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 NR1H4Q96RI1 486 aaPredicted RBP18.58■□□□□ 0.56
RAB40B-207ENST00000572603 OR51I2Q9H344 312 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 ZCCHC4Q9H5U6 513 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 FN3KRPQ9HA64 309 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 C1orf123Q9NWV4 160 aa18.58■□□□□ 0.56
RAB40B-207ENST00000572603 YLPM1P49750 1951 aaKnown RBP18.58■□□□□ 0.56
RAB40B-207ENST00000572603 HIVEP1P15822 2718 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 IGKV1-27A0A075B6S5 117 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 LRP5LA4QPB2 252 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 CLDN25C9JDP6 229 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 TMEM178BH3BS89 294 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 INMTO95050 263 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 NR4A2P43354 598 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 RPS25P62851 125 aaKnown RBP18.57■□□□□ 0.56
RAB40B-207ENST00000572603 CNN3Q15417 329 aaKnown RBP18.57■□□□□ 0.56
RAB40B-207ENST00000572603 ARMCX4Q5H9R4 360 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 CRIP3Q6Q6R5 217 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 KCTD8Q6ZWB6 473 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 TSPAN14Q8NG11 270 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 TRMT10AQ8TBZ6 339 aaKnown RBP18.57■□□□□ 0.56
RAB40B-207ENST00000572603 RPL3LQ92901 407 aaKnown RBP18.57■□□□□ 0.56
RAB40B-207ENST00000572603 DERL3Q96Q80 235 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 TMED9Q9BVK6 235 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 TAS2R4Q9NYW5 299 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 ACANP16112 2415 aa18.57■□□□□ 0.56
RAB40B-207ENST00000572603 A6NLC8 198 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 ZNF879B4DU55 563 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 IFNL4K9M1U5 179 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 PIN1P1O15428 100 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 CYB5R3P00387 301 aaPredicted RBP18.56■□□□□ 0.56
RAB40B-207ENST00000572603 CD2P06729 351 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 SMIM18P0DKX4 95 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 SLC25A16P16260 332 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 AZGP1P25311 298 aaKnown RBP18.56■□□□□ 0.56
RAB40B-207ENST00000572603 GPR6P46095 362 aaPredicted RBP18.56■□□□□ 0.56
RAB40B-207ENST00000572603 TMEM33P57088 247 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 WDR82Q6UXN9 313 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 UNQ9370/PRO34162Q6UXP9 181 aa18.56■□□□□ 0.56
RAB40B-207ENST00000572603 SERPINA12Q8IW75 414 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms