RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TMEM160Q9NX00 188 aa6.53□□□□□ -1.36
SMG6-211ENST00000572369 DNAJB11Q9UBS4 358 aa6.53□□□□□ -1.36
SMG6-211ENST00000572369 EXOGQ9Y2C4 368 aaKnown RBP6.53□□□□□ -1.36
SMG6-211ENST00000572369 MYRFQ9Y2G1 1151 aa6.53□□□□□ -1.36
SMG6-211ENST00000572369 ABCA1O95477 2261 aa6.53□□□□□ -1.36
SMG6-211ENST00000572369 MALRD1Q5VYJ5 2156 aa6.52□□□□□ -1.36
SMG6-211ENST00000572369 TRAV38-1A0A0B4J264 116 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 A0A0G2JMP0 313 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 A0A0X1KG70 313 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 LOC107986453A0A1B0GWG9 222 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 IRGMA1A4Y4 181 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 A6NIN4 97 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 CEACAM18A8MTB9 384 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZNF732B4DXR9 585 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 E9PQ18 207 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 C3orf80F5H4A9 247 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 H0YAE9 185 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 LGALS8O00214 317 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 DLGAP1O14490 977 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 CDIPTO14735 213 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 FOXH1O75593 365 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SERPINA3P01011 423 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 OCM2P0CE71 109 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 OCMP0CE72 109 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 FAM157CP0CG43 387 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 UBCP0CG48 685 aaKnown RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZNF20P17024 532 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SRD5A1P18405 259 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 MYL12AP19105 171 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 GBX2P52951 348 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 GNG3P63215 75 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 CSNK2BP67870 215 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ADARB1P78563 741 aaKnown RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZNF154Q13106 437 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 IL18R1Q13478 541 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 CEACAM21Q3KPI0 293 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZNF404Q494X3 552 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 CDONQ4KMG0 1287 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 WDR38Q5JTN6 314 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZBTB37Q5TC79 503 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 TMEM244Q5VVB8 128 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 DCDC5Q6ZRR9 648 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ZNF676Q8N7Q3 588 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SCCPDHQ8NBX0 429 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 OR4M2Q8NGB6 313 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 OR52I1Q8NGK6 324 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 APH1BQ8WW43 257 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 OR5P3Q8WZ94 311 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 RORBQ92753 470 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 RPL3LQ92901 407 aaKnown RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 ITPKCQ96DU7 683 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 TECTBQ96PL2 329 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 COMMD4Q9H0A8 199 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 METTL17Q9H7H0 456 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 RNPEPL1Q9HAU8 725 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 TMEM165Q9HC07 324 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 INPP5EQ9NRR6 644 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 GPR173Q9NS66 373 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 CHCHD3Q9NX63 227 aaKnown RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 ERVK-18Q9QC07 812 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 NKX1-2Q9UD57 310 aaPredicted RBP6.52□□□□□ -1.37
SMG6-211ENST00000572369 OR5V1Q9UGF6 321 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 SLC7A11Q9UPY5 501 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 LRCH1Q9Y2L9 728 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 V9GYS6 101 aa6.52□□□□□ -1.37
SMG6-211ENST00000572369 IGHV3OR15-7A0A075B7D8 119 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 A0A1B0GTI1 187 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 FAM230AA0A1W2PPH8 454 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 ANKRD61A6NGH8 418 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 OOEPA6NGQ2 149 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 OR5B21A6NL26 309 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 J3QRE1 110 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 AKR7A2O43488 359 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 ADAM20O43506 726 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 NDUFA2O43678 99 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 WBP4O75554 376 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 PTBP3O95758 552 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 GYPAP02724 150 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 DCKP27707 260 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 THBS2P35442 1172 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 KIR3DL2P43630 455 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 PITPNBP48739 271 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 SEC61A1P61619 476 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 HOXA4Q00056 320 aaPredicted RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 SRSF2Q01130 221 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 MRPL28Q13084 256 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 ALKBH1Q13686 389 aaKnown RBP6.51□□□□□ -1.37
SMG6-211ENST00000572369 MICBQ29980 383 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 LYPD2Q6UXB3 125 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 WDR82Q6UXN9 313 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 TMPRSS11AQ6ZMR5 421 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 WDR86Q86TI4 376 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 ZNF573Q86YE8 665 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 SYS1Q8N2H4 156 aa6.51□□□□□ -1.37
SMG6-211ENST00000572369 PRSS35Q8N3Z0 413 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms