RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PTGES3Q15185 160 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 TBCEQ15813 527 aaPredicted RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 KCNJ8Q15842 424 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 MESTQ5EB52 335 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 SYT6Q5T7P8 510 aaPredicted RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 ZBTB37Q5TC79 503 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 UBE2UQ5VVX9 321 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 C12orf73Q69YU5 71 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 C11orf88Q6PI97 169 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 COLCA1Q6ZS62 124 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 SLC16A12Q6ZSM3 486 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 BOLLQ8N9W6 283 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 OR5L1Q8NGL2 311 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 SLC7A13Q8TCU3 470 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 NPRL2Q8WTW4 380 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 C17orf50Q8WW18 174 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 ST8SIA4Q92187 359 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 TNFRSF14Q92956 283 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 COPS4Q9BT78 406 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 POLR2J3Q9H1A7 115 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 ANKRD19PQ9H560 264 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 CNTD2Q9H8S5 307 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 ACOT13Q9NPJ3 140 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 ONECUT1Q9UBC0 465 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 DNAJB11Q9UBS4 358 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 ADAM18Q9Y3Q7 739 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 TENM2Q9NT68 2774 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 TEX13CA0A0J9YWL9 993 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 A6NIZ1 184 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 M0R129 80 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 IMPA2O14732 288 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 GABARAPO95166 117 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 OR5F1O95221 314 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 ECDO95905 644 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 CDK1P06493 297 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 PSMB9P28065 219 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 POU1F1P28069 291 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 IFNA8P32881 189 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 IFNGR2P38484 337 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 TAS2R41P59536 307 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 RAP1BP61224 184 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 RAP1AP62834 184 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 COL10A1Q03692 680 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 POU4F2Q12837 409 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 GK2Q14410 553 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 OR8B8Q15620 311 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 RSPO1Q2MKA7 263 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 KRTAP27-1Q3LI81 207 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 PTCHD4Q6ZW05 846 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 GCSAMQ8N6F7 178 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 OR4C13Q8NGP0 309 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 WIPF2Q8TF74 440 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 GGHQ92820 318 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 R3HDM4Q96D70 268 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 YIPF6Q96EC8 236 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 AJUBAQ96IF1 538 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 POLR2J2Q9GZM3 115 aaKnown RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 RANBP3Q9H6Z4 567 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 FN3KRPQ9HA64 309 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 CLN6Q9NWW5 311 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 CNOT2Q9NZN8 540 aaKnown RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 KAAG1Q9UBP8 84 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 CAB39Q9Y376 341 aaPredicted RBP8.08□□□□□ -1.12
TPM1-225ENST00000560679 MED31Q9Y3C7 131 aa8.08□□□□□ -1.12
TPM1-225ENST00000560679 IGHV3OR15-7A0A075B7D8 119 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 TRAV38-1A0A0B4J264 116 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 MEIOCA2RUB1 952 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 SLC22A1O15245 554 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 NDUFA2O43678 99 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 FBXO24O75426 580 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 SOX14O95416 240 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 PPP1R3DO95685 299 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 PIPP12273 146 aaPredicted RBP8.07□□□□□ -1.12
TPM1-225ENST00000560679 IFI30P13284 250 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 CA6P23280 308 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 ANOS1P23352 680 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 PAX6P26367 422 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 HIST1H3AP68431 136 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 ST3GAL3Q11203 375 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 HABP2Q14520 560 aaPredicted RBP8.07□□□□□ -1.12
TPM1-225ENST00000560679 IRF3Q14653 427 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 LY6EQ16553 131 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 C11orf91Q3C1V1 193 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 HIST2H3PS2Q5TEC6 136 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 TEX36Q5VZQ5 186 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 TMEM236Q5W0B7 351 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 ZNF826PQ6ZT77 177 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 HIST2H3AQ71DI3 136 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 FAM122BQ7Z309 247 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 NDUFA11Q86Y39 141 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 STX19Q8N4C7 294 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 SPERTQ8NA61 448 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 BEND2Q8NDZ0 799 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 OR13C2Q8NGS9 318 aa8.07□□□□□ -1.12
TPM1-225ENST00000560679 OR51A7Q8NH64 312 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms