RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PDZD9Q8IXQ8 264 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 OR8B12Q8NGG6 310 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 ASB17Q8WXJ9 295 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 TAF15Q92804 592 aaKnown RBP eCLIP10.1□□□□□ -0.79
SPG11-219ENST00000559822 RPL3LQ92901 407 aaKnown RBP10.1□□□□□ -0.79
SPG11-219ENST00000559822 NRBF2Q96F24 287 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 SNTG1Q9NSN8 517 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 DNAJB9Q9UBS3 223 aa10.1□□□□□ -0.79
SPG11-219ENST00000559822 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
SPG11-219ENST00000559822 TMEM269A0A1B0GVZ9 245 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 A0A1B0GW55 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 A0A1W2PQ09 198 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 OR5B21A6NL26 309 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 M0QZ24 198 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 M0R1W7 72 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 GYG2O15488 501 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 GSC2O15499 205 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 AKR7A2O43488 359 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 ZNF254O75437 659 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 PAHP00439 452 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 IGHV4-59P01825 116 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 NDUFB7P17568 137 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 SLC2A5P22732 501 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 GLRA1P23415 457 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 CAV3P56539 151 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 RELBQ01201 579 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 RIPPLY1Q0D2K3 151 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 OCLNQ16625 522 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 ZBTB37Q5TC79 503 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4L9Q6RFH8 374 aaPredicted RBP10.09□□□□□ -0.79
SPG11-219ENST00000559822 OR5T2Q8NGG2 359 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 ANGPTL6Q8NI99 470 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 ZNF671Q8TAW3 534 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 HPSE2Q8WWQ2 592 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 SEH1LQ96EE3 360 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 LYZL4Q96KX0 146 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 WDR13Q9H1Z4 485 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 PPP1R3EQ9H7J1 279 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 METTL8Q9H825 291 aaKnown RBP10.09□□□□□ -0.79
SPG11-219ENST00000559822 SIRT7Q9NRC8 400 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 PAPOLBQ9NRJ5 636 aaKnown RBP10.09□□□□□ -0.79
SPG11-219ENST00000559822 TVP23BQ9NYZ1 205 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 NLKQ9UBE8 527 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 KLHDC2Q9Y2U9 406 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
SPG11-219ENST00000559822 MEGF8Q7Z7M0 2845 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 PKD1L1Q8TDX9 2849 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 TRBV23-1A0A0A0MS06 115 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 OR2AT4A6NND4 320 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 SIGLEC5O15389 551 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 FKBP6O75344 327 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 MTRF1O75570 445 aaKnown RBP10.08□□□□□ -0.8
SPG11-219ENST00000559822 ACAA1P09110 424 aaPredicted RBP10.08□□□□□ -0.8
SPG11-219ENST00000559822 GABRA2P47869 451 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 GPM6AP51674 278 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 RIDAP52758 137 aaKnown RBP10.08□□□□□ -0.8
SPG11-219ENST00000559822 ACTR3P61158 418 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 ELF3P78545 371 aaPredicted RBP10.08□□□□□ -0.8
SPG11-219ENST00000559822 CEACAM21Q3KPI0 293 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 DHRS7BQ6IAN0 325 aaPredicted RBP10.08□□□□□ -0.8
SPG11-219ENST00000559822 KRT74Q7RTS7 529 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 ZNF679Q8IYX0 411 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 HS3ST5Q8IZT8 346 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 FGFRL1Q8N441 504 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 BBS1Q8NFJ9 593 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 GAFA1Q96PS6 74 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 TEAD3Q99594 435 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 CITED1Q99966 193 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 FAM206AQ9NX38 181 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 ZNRD1Q9P1U0 126 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
SPG11-219ENST00000559822 TCRBV3S1A0A5B6 114 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 NPFFO15130 113 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 SELLP14151 372 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 AMY2BP19961 511 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 PRKACGP22612 351 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 UBE2E1P51965 193 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 CRISP1P54107 249 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 ESRRGP62508 458 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 ROM1Q03395 351 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 DGUOKQ16854 277 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 SMIM21Q3B7S5 101 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 CEP78Q5JTW2 689 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 TMEM236Q5W0B7 351 aa10.07□□□□□ -0.8
SPG11-219ENST00000559822 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms