RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF732B4DXR9 585 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 SC5DO75845 299 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 SERPINA3P01011 423 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 CD2P06729 351 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF154Q13106 437 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 TESK1Q15569 626 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 MICU1Q9BPX6 476 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 RTL8AQ9BWD3 113 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 ZCCHC4Q9H5U6 513 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 TRAV8-7A0A075B6U6 113 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 IGHV1-69-2A0A0G2JMI3 117 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 PMELP40967 661 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 UTS2BQ765I0 119 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 RNF144BQ7Z419 303 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 CEACAM19Q7Z692 300 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 OR5D14Q8NGL3 314 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 CCL17Q92583 94 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
NEDD1-213ENST00000557644 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 CHD3Q12873 2000 aaKnown RBP12.92□□□□□ -0.34
NEDD1-213ENST00000557644 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
NEDD1-213ENST00000557644 JUNBP17275 347 aaPredicted RBP12.91□□□□□ -0.34
NEDD1-213ENST00000557644 ATF1P18846 271 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 TNFRSF1AP19438 455 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 CARTPTQ16568 116 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 UNQ9370/PRO34162Q6UXP9 181 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF826PQ6ZT77 177 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 C14orf119Q9NWQ9 140 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 PPP1R3CQ9UQK1 317 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 IGKV1-27A0A075B6S5 117 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 PTBP3O95758 552 aaKnown RBP12.91□□□□□ -0.34
NEDD1-213ENST00000557644 TGFBR2P37173 567 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 CRYBB2P43320 205 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 FAM76BQ5HYJ3 339 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 C11orf53Q8IXP5 236 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 CELF2-AS1Q8N7Q2 184 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 RPL3LQ92901 407 aaKnown RBP12.91□□□□□ -0.34
NEDD1-213ENST00000557644 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 NKX3-1Q99801 234 aaPredicted RBP12.91□□□□□ -0.34
NEDD1-213ENST00000557644 ABCB9Q9NP78 766 aa12.91□□□□□ -0.34
NEDD1-213ENST00000557644 OTOGQ6ZRI0 2925 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 PQLC2LA1A4F0 135 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 A6NLC8 198 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 GABRPO00591 440 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 SULT1B1O43704 296 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 RGS9O75916 674 aaPredicted RBP12.9□□□□□ -0.34
NEDD1-213ENST00000557644 AZGP1P25311 298 aaKnown RBP12.9□□□□□ -0.34
NEDD1-213ENST00000557644 GATA4P43694 442 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 GNG3P63215 75 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF529Q6P280 563 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 ANGPTL5Q86XS5 388 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 LRRC75A-AS1Q8N1F1 130 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 RDH5Q92781 318 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 ITGB1BP2Q9UKP3 347 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 SLC7A11Q9UPY5 501 aa12.9□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF469Q96JG9 3925 aaPredicted RBP12.9□□□□□ -0.34
NEDD1-213ENST00000557644 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 CDIPTO14735 213 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 RP2O75695 350 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 TFAP2AP05549 437 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 OCMP0CE72 109 aaPredicted RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 CD36P16671 472 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 TRAM1Q15629 374 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 KRTAP1-3Q8IUG1 177 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 RAB3AP20336 220 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 HAAOP46952 286 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 ART1P52961 327 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 CNN3Q15417 329 aaKnown RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 Q5PR19 223 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 SCCPDHQ8NBX0 429 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 RFT1Q96AA3 541 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
NEDD1-213ENST00000557644 C1orf123Q9NWV4 160 aa12.89□□□□□ -0.35
NEDD1-213ENST00000557644 GPX5O75715 221 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 RHBDL1O75783 438 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 CYB5R3P00387 301 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-213ENST00000557644 PLATP00750 562 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 GADD45AP24522 165 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms