RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 HFEQ30201 348 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 Q5PR19 223 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 SYT6Q5T7P8 510 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 OR1M1Q8NGA1 313 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 OR5A2Q8NGI9 324 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 BORCS8Q96FH0 119 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 GCM1Q9NP62 436 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 IGKV1-9A0A0C4DH69 117 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 OR5B21A6NL26 309 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 SULT1B1O43704 296 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 PLATP00750 562 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 RAB3AP20336 220 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 AZGP1P25311 298 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 CRYBB2P43320 205 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 FABP5Q01469 135 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 ZNF154Q13106 437 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 TRAM1Q15629 374 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 FAM27D1Q5T7N8 215 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 CLEC2AQ6UVW9 174 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 KRT74Q7RTS7 529 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 LRRC75A-AS1Q8N1F1 130 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 CELF2-AS1Q8N7Q2 184 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 RPL3LQ92901 407 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 YIPF5Q969M3 257 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 SPACA5Q96QH8 159 aa11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 EXOSC4Q9NPD3 245 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 SF3B6Q9Y3B4 125 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-208ENST00000556412 PLCE1Q9P212 2302 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 POLQO75417 2590 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 TMEM210A6NLX4 147 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 CDIPTO14735 213 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 IRF2P14316 349 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 PRKACBP22694 351 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 TGFBR2P37173 567 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 HAAOP46952 286 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 HAGHLQ6PII5 290 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 OR51A2Q8NGJ7 313 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 THRSPQ92748 146 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 NBPF19A0A087WUL8 3843 aa11.87□□□□□ -0.51
VIPAS39-208ENST00000556412 CSMD2Q7Z408 3487 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 TRAV8-7A0A075B6U6 113 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 TRBV5-7A0A0A0MS05 114 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 PQLC2LA1A4F0 135 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 GABRPO00591 440 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 PIN1P1O15428 100 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 MAGEB3O15480 346 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 MAS1P04201 325 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 CD36P16671 472 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 PDLIM4P50479 330 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 FUT6P51993 359 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 MTCP1P56278 107 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 GMFBP60983 142 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 CLEC12BQ2HXU8 276 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 HSD17B12Q53GQ0 312 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 ASPHD2Q6ICH7 369 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 TMEM91Q6ZNR0 172 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 SATL1Q86VE3 508 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 ANGPTL5Q86XS5 388 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 OR11L1Q8NGX0 322 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 RFT1Q96AA3 541 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 NEK6Q9HC98 313 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 TCF7L1Q9HCS4 588 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 DLL4Q9NR61 685 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 PPIHO43447 177 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 JUNBP17275 347 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 GATA4P43694 442 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 POU3F4P49335 361 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 RBP2P50120 134 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 ATP1B3P54709 279 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 ZNF573Q86YE8 665 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 FAM168AQ92567 244 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 NKX3-1Q99801 234 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 FOXC2Q99958 501 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 OR51I2Q9H344 312 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-208ENST00000556412 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
VIPAS39-208ENST00000556412 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
VIPAS39-208ENST00000556412 SC5DO75845 299 aa11.85□□□□□ -0.51
VIPAS39-208ENST00000556412 ZNF205O95201 554 aa11.85□□□□□ -0.51
VIPAS39-208ENST00000556412 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-208ENST00000556412 PMELP40967 661 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms