RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	MRPS18B	Q9Y676	258 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		V9GYH0	126 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GTF3C1	Q12789	2109 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CACNA1G	O43497	2377 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		A0A0G2JMM0	328 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574		A0A1W2PPB8	328 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574		A0A1W2PRS3	328 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SMIM30	A4D0T7	59 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ANKRD61	A6NGH8	418 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OR4C45	A6NMZ5	311 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	KIR3DP1	A8MWS1	328 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	INAFM1	C9JVW0	142 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ZNF254	O75437	659 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	KHDRBS3	O75525	346 aa	Known RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ZNF432	O94892	652 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RPP14	O95059	124 aa	Known RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OPN1LW	P04000	364 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RAF1	P04049	648 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OCM2	P0CE71	109 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OCM	P0CE72	109 aa	Predicted RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ZNF823	P16415	610 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RAB3B	P20337	219 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	CSRP1	P21291	193 aa	Known RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	CNR1	P21554	472 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	NBL1	P41271	181 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	CAV3	P56539	151 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	B3GALT5-AS1	P59052	145 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OC90	Q02509	493 aa	Predicted RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SRSF4	Q08170	494 aa	Known RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SLC17A1	Q14916	467 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ZNF79	Q15937	498 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	TRIM16L	Q309B1	348 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574		Q499Y3	187 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	MORN5	Q5VZ52	161 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SFXN4	Q6P4A7	337 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	XKRX	Q6PP77	449 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DEGS2	Q6QHC5	323 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574		Q75L30	129 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SNX29P2	Q8IUI4	249 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	WDFY1	Q8IWB7	410 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	GDPD1	Q8N9F7	314 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	CLEC1A	Q8NC01	280 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	PRSS33	Q8NF86	280 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	NOXO1	Q8NFA2	376 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OR13C5	Q8NGS8	318 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OR2G2	Q8NGZ5	317 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OR52N5	Q8NH56	324 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OCC1	Q8TAD7	63 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ST7L	Q8TDW4	575 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RNF128	Q8TEB7	428 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	HSD17B8	Q92506	261 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RGP1	Q92546	391 aa	Predicted RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	NSMAF	Q92636	917 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DIRAS2	Q96HU8	199 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DERL3	Q96Q80	235 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	AMELY	Q99218	206 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SDHC	Q99643	169 aa	Predicted RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	FAM173A	Q9BQD7	235 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	UTP23	Q9BRU9	249 aa	Known RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	EMC6	Q9BV81	110 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	OR2B2	Q9GZK3	357 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SRR	Q9GZT4	340 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	COMMD4	Q9H0A8	199 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SP140L	Q9H930	580 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ELOVL3	Q9HB03	270 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ABCB10	Q9NRK6	738 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DEPP	Q9NTK1	212 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	FAIM	Q9NVQ4	179 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SLCO1C1	Q9NYB5	712 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DAPK2	Q9UIK4	370 aa		4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	BOK	Q9UMX3	212 aa	Predicted RBP	4.09	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	IGKV1D-43	A0A0B4J1Z2	117 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574		A0A0J9YW62	118 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	TRBV5-5	A0A0J9YX44	114 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SPAAR	A0A1B0GVQ0	90 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	FABP12	A6NFH5	140 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	TNFRSF13B	O14836	293 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SLC19A2	O60779	497 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RAMP1	O60894	148 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	WISP2	O76076	250 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	MPZL1	O95297	269 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	PTTG1	O95997	202 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	SRM	P19623	302 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	MPZ	P25189	248 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ITGA3	P26006	1051 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	LAP3	P28838	519 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RBMS1	P29558	406 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	AMT	P48728	403 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	EVX1	P49640	407 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	ZNF133	P52736	654 aa	Predicted RBP	4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	RIDA	P52758	137 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DEFA1	P59665	94 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	DEFA3	P59666	94 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	GAGE2B	Q13066	116 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	EIF2B1	Q14232	305 aa	Known RBP	4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	GAGE2E	Q4V326	116 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	HSD17B12	Q53GQ0	312 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	IDNK	Q5T6J7	187 aa		4.08	□□□□□ -1.76
PPP4R3A-204	ENST00000554574	GAGE2A	Q6NT46	116 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms