RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CTPS2Q9NRF8 586 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 ARMC1Q9NVT9 282 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 RSL24D1Q9UHA3 163 aaKnown RBP3.98□□□□□ -1.77
NPAS3-204ENST00000546849 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 NUP50Q9UKX7 468 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 PRG3Q9Y2Y8 225 aaPredicted RBP3.98□□□□□ -1.77
NPAS3-204ENST00000546849 GCN1Q92616 2671 aaKnown RBP3.98□□□□□ -1.77
NPAS3-204ENST00000546849 DNAH14Q0VDD8 3507 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 FAM186AA6NE01 2351 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 USP24Q9UPU5 2620 aa3.98□□□□□ -1.77
NPAS3-204ENST00000546849 RIF1Q5UIP0 2472 aaKnown RBP3.98□□□□□ -1.77
NPAS3-204ENST00000546849 TDRD6O60522 2096 aaKnown RBP3.98□□□□□ -1.77
NPAS3-204ENST00000546849 RAI1Q7Z5J4 1906 aaPredicted RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 COL4A5P29400 1685 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 XIRP2A4UGR9 3374 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 A0A0B4J2A0 478 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 A0A1W2PP18 115 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 DHRS12A0PJE2 317 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 MYBPHLA2RUH7 354 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 EVPLLA8MZ36 301 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SUPT3HB4E1H0 165 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 UBXN8O00124 270 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 DLGAP1O14490 977 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 PFDN1O60925 122 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 WBP4O75554 376 aaKnown RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 H6PDO95479 791 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 IGLV3-25P01717 112 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 GAPDHP04406 335 aaKnown RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 ASGR1P07306 291 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 HMOX2P30519 316 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 HOXA9P31269 272 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SLC1A2P43004 574 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 CRYBB2P43320 205 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 OR1G1P47890 313 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 CCNHP51946 323 aaPredicted RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SUCLG1P53597 346 aaKnown RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 FBXW4P57775 412 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 AP1S1P61966 158 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 REG3AQ06141 175 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 AQP6Q13520 282 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 FZD2Q14332 565 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 GK3PQ14409 553 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 ZNF678Q5SXM1 525 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SYPL2Q5VXT5 272 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 PTRHD1Q6GMV3 140 aaKnown RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 ERICH5Q6P6B1 374 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 TTC33Q6PID6 262 aaPredicted RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 FAM92BQ6ZTR7 304 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 CMC1Q7Z7K0 106 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 OR8J3Q8NGG0 315 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 AKR7LQ8NHP1 331 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 MARCH1Q8TCQ1 289 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 KCTD4Q8WVF5 259 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 PYDC1Q8WXC3 89 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 RCN3Q96D15 328 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 FOPNLQ96NB1 174 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 BIRC8Q96P09 236 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 C1orf50Q9BV19 199 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 GPR61Q9BZJ8 451 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 CCNB1IP1Q9NPC3 277 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 TREX1Q9NSU2 369 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 DDX18Q9NVP1 670 aaKnown RBP3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SCN3BQ9NY72 215 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 CCDC167Q9P0B6 97 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 SHPKQ9UHJ6 478 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 C3orf18Q9UK00 162 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 TMED5Q9Y3A6 229 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 HES2Q9Y543 173 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 GMEB1Q9Y692 573 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 LRRC37A2A6NM11 1700 aa3.97□□□□□ -1.77
NPAS3-204ENST00000546849 ZNF462Q96JM2 2506 aa3.96□□□□□ -1.77
NPAS3-204ENST00000546849 NCOR2Q9Y618 2525 aa3.96□□□□□ -1.77
NPAS3-204ENST00000546849 LCTP09848 1927 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 SCN1AP35498 2009 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 MICAL3Q7RTP6 2002 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 A0A0J9YYE9 177 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 A0A0U1RQS6 177 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 LOC285095A0A1B0GVY8 99 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 BOLA2-SMG1P6H3BVE0 249 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 PRMT5O14744 637 aaPredicted RBP3.96□□□□□ -1.78
NPAS3-204ENST00000546849 KDELR3O43731 214 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 DFNA5O60443 496 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 SCELO95171 688 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 C1QAP02745 245 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 RHOCP08134 193 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 ANXA5P08758 320 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 UBTFL6P0CB48 400 aaPredicted RBP3.96□□□□□ -1.78
NPAS3-204ENST00000546849 PRPS2P11908 318 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 AK4P27144 223 aaPredicted RBP3.96□□□□□ -1.78
NPAS3-204ENST00000546849 NPBWR2P48146 333 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 PSMD7P51665 324 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 CCR8P51685 355 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 STC1P52823 247 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 ACTA1P68133 377 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 CRADDP78560 199 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 MRPS22P82650 360 aaKnown RBP3.96□□□□□ -1.78
NPAS3-204ENST00000546849 GNA12Q03113 381 aa3.96□□□□□ -1.78
NPAS3-204ENST00000546849 TMEM183BQ1AE95 376 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms