RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZNF12P17014 697 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 CHN2P52757 468 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 DMKNQ6E0U4 476 aaPredicted RBP12.69□□□□□ -0.38
CD9-210ENST00000543916 KCTD8Q6ZWB6 473 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 OR13C3Q8NGS6 347 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 OR11L1Q8NGX0 322 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 FGGYQ96C11 551 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 SMIM19Q96E16 107 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 TIMD4Q96H15 378 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 MND1Q9BWT6 205 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 COMMD4Q9H0A8 199 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 TLNRD1Q9H1K6 362 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 TRIM36Q9NQ86 728 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 ERGIC3Q9Y282 383 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
CD9-210ENST00000543916 MED13LQ71F56 2210 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 ISPDA4D126 451 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 TMEM210A6NLX4 147 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 LRRC30A6NM36 301 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 ZNF732B4DXR9 585 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 BTG1P62324 171 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 GNG3P63215 75 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 UBE2V2Q15819 145 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 TMEM249Q2WGJ8 235 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
CD9-210ENST00000543916 OR5A2Q8NGI9 324 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 RPL3LQ92901 407 aaKnown RBP12.68□□□□□ -0.38
CD9-210ENST00000543916 HPS1Q92902 700 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 C10orf35Q96D05 121 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 OR5M11Q96RB7 305 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 CHST5Q9GZS9 411 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 GSX1Q9H4S2 264 aaPredicted RBP12.68□□□□□ -0.38
CD9-210ENST00000543916 METTL17Q9H7H0 456 aaPredicted RBP12.68□□□□□ -0.38
CD9-210ENST00000543916 RNF7Q9UBF6 113 aa12.68□□□□□ -0.38
CD9-210ENST00000543916 F8P00451 2351 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 ABCA2Q9BZC7 2435 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 PNMA8CA0A1B0GUJ8 204 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 hCG_1807616A0A1W2PRN6 198 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 PQLC2LA1A4F0 135 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 OR5B21A6NL26 309 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 CDIPTO14735 213 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 LY6G6DO95868 133 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 IGHV4-31P0DP07 118 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 IRF2P14316 349 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 ZNF20P17024 532 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 EGR1P18146 543 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 CD80P33681 288 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 LMO4P61968 165 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 PRSS48Q7RTY5 328 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 GCSAMQ8N6F7 178 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 C19orf18Q8NEA5 215 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 TRMT10AQ8TBZ6 339 aaKnown RBP12.67□□□□□ -0.38
CD9-210ENST00000543916 NPRL2Q8WTW4 380 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 PGLYRP3Q96LB9 341 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 CCDC90BQ9GZT6 254 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 OR51I2Q9H344 312 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 BLOC1S6Q9UL45 172 aa12.67□□□□□ -0.38
CD9-210ENST00000543916 ACANP16112 2415 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 C3orf80F5H4A9 247 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 GATBO75879 557 aaKnown RBP12.66□□□□□ -0.38
CD9-210ENST00000543916 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
CD9-210ENST00000543916 MAP2K4P45985 399 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 TAS2R43P59537 309 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 LRRC28Q86X40 367 aaPredicted RBP12.66□□□□□ -0.38
CD9-210ENST00000543916 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
CD9-210ENST00000543916 LRRC29Q8WV35 223 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
CD9-210ENST00000543916 GHSRQ92847 366 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 GAL3ST1Q99999 423 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 ZNF665Q9H7R5 613 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
CD9-210ENST00000543916 IGKV1-27A0A075B6S5 117 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 FAM230AA0A1W2PPH8 454 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 RHBDL1O75783 438 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 LHBP01229 141 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 IGHV2-5P01817 119 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.38
CD9-210ENST00000543916 PPIAL4FP0DN26 164 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 CELP19835 753 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 CFHR2P36980 270 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
CD9-210ENST00000543916 SOX2P48431 317 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
CD9-210ENST00000543916 BDH1Q02338 343 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms