RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	RPL5	P46777	297 aa	Known RBP	8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	ATP1B3	P54709	279 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	MTCP1	P56278	107 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	MAB21L1	Q13394	359 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	HFE	Q30201	348 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	SPRN	Q5BIV9	151 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	FAM27D1	Q5T7N8	215 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	UNQ9370/PRO34162	Q6UXP9	181 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	KRT74	Q7RTS7	529 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	GPR141	Q7Z602	305 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF573	Q86YE8	665 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR11L1	Q8NGX0	322 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	HPSE2	Q8WWQ2	592 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	IGFBPL1	Q8WX77	278 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	PHYHIP	Q92561	330 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	RDH5	Q92781	318 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	NINJ1	Q92982	152 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	SPSB1	Q96BD6	273 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMIGD2	Q96BF3	282 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	GPER1	Q99527	375 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	CHCHD6	Q9BRQ6	235 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR51E2	Q9H255	320 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	FN3KRP	Q9HA64	309 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF701	Q9NV72	531 aa	Predicted RBP	8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	C1orf123	Q9NWV4	160 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	ITGB1BP2	Q9UKP3	347 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	STUB1	Q9UNE7	303 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	GSTK1	Q9Y2Q3	226 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	SF3B6	Q9Y3B4	125 aa	Known RBP	8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	USF3	Q68DE3	2245 aa		8.61	□□□□□ -1.03
CPSF7-221	ENST00000543545	TRAV8-7	A0A075B6U6	113 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	IGKV1-9	A0A0C4DH69	117 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	IGHV1-69-2	A0A0G2JMI3	117 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LOC100289279	A0A1B0GTE1	492 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545		A0A1B0GWJ7	208 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LRP5L	A4QPB2	252 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LRRC30	A6NM36	301 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LYNX1	G3V0Z9	82 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	CDIPT	O14735	213 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	PIN1P1	O15428	100 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	GPX5	O75715	221 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	PLAT	P00750	562 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	IGHV4-39	P01824	125 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	TFAP2A	P05549	437 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	UCHL1	P09936	223 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LYNX1	P0DP58	116 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	SRM	P19623	302 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	GADD45A	P24522	165 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	COL8A2	P25067	703 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	CALR	P27797	417 aa	Known RBP	8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	BDKRB2	P30411	391 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	CRYBB2	P43320	205 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	HAAO	P46952	286 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	POU3F4	P49335	361 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	RBP2	P50120	134 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	MPPED2	Q15777	294 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	TIMM50	Q3ZCQ8	353 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	C22orf42	Q6IC83	251 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	HAGHL	Q6PII5	290 aa	Predicted RBP	8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMEM91	Q6ZNR0	172 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	LHFPL2	Q6ZUX7	228 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	ANGPTL5	Q86XS5	388 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	CELF2-AS1	Q8N7Q2	184 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	BOLL	Q8N9W6	283 aa	Known RBP	8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR51A2	Q8NGJ7	313 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF671	Q8TAW3	534 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	RPL3L	Q92901	407 aa	Known RBP	8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	MBD6	Q96DN6	1003 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	YIPF6	Q96EC8	236 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	SPACA5	Q96QH8	159 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	GSX2	Q9BZM3	304 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	FGF23	Q9GZV9	251 aa	Predicted RBP	8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMEM138	Q9NPI0	162 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	DLL4	Q9NR61	685 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	SNTG1	Q9NSN8	517 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	FOXJ3	Q9UPW0	622 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	BAHCC1	Q9P281	2608 aa		8.6	□□□□□ -1.03
CPSF7-221	ENST00000543545	FLNB	O75369	2602 aa	Known RBP	8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	PQLC2L	A1A4F0	135 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	MEGF11	A6BM72	1044 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	AIRE	O43918	545 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	ALX3	O95076	343 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	CYB5A	P00167	134 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	PAX1	P15863	534 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	MYL9	P24844	172 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	ALDH3B2	P48448	385 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	PDLIM4	P50479	330 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	GMFB	P60983	142 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	LSM3	P62310	102 aa	Known RBP	8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF154	Q13106	437 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	DDI2	Q5TDH0	399 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	CLEC2A	Q6UVW9	174 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF826P	Q6ZT77	177 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	PEG10	Q86TG7	708 aa	Known RBP	8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	WDR86	Q86TI4	376 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	JAGN1	Q8N5M9	183 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	SCCPDH	Q8NBX0	429 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	DNAAF1	Q8NEP3	725 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR52N4	Q8NGI2	321 aa		8.59	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR13F1	Q8NGS4	319 aa		8.59	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms