RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
DDX55-210ENST00000543016 IRF2P14316 349 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 JUNBP17275 347 aaPredicted RBP10.31□□□□□ -0.76
DDX55-210ENST00000543016 ATF1P18846 271 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 GIFP27352 417 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 CFHR2P36980 270 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 ART1P52961 327 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 PPP3R1P63098 170 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 LIPKQ5VXJ0 399 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 UNQ9370/PRO34162Q6UXP9 181 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 DNM1P46Q6ZS02 220 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 KCTD8Q6ZWB6 473 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 PEG10Q86TG7 708 aaKnown RBP10.31□□□□□ -0.76
DDX55-210ENST00000543016 ADAT3Q96EY9 351 aaPredicted RBP10.31□□□□□ -0.76
DDX55-210ENST00000543016 TIMD4Q96H15 378 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 TLNRD1Q9H1K6 362 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 GCM1Q9NP62 436 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 TRBV5-7A0A0A0MS05 114 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 PNMA8CA0A1B0GUJ8 204 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 MEGF11A6BM72 1044 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 TRIM64BA6NI03 449 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ZNF732B4DXR9 585 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 MAGEB3O15480 346 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 SULT1B1O43704 296 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 NDUFS7O75251 213 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ALDOBP05062 364 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 FSTP19883 344 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 RAB3AP20336 220 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 PSMB9P28065 219 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ATP1B3P54709 279 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 UBE2V2Q15819 145 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 CLEC12BQ2HXU8 276 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ACSM3Q53FZ2 586 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 Q5PR19 223 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ZNF529Q6P280 563 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 LHFPL2Q6ZUX7 228 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 CDH26Q8IXH8 852 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 OR1M1Q8NGA1 313 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 OR10Z1Q8NGY1 313 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 ZNF671Q8TAW3 534 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 HPSE2Q8WWQ2 592 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 FAM168AQ92567 244 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 BORCS8Q96FH0 119 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 OR51I2Q9H344 312 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 GPR173Q9NS66 373 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 NDUFB11Q9NX14 153 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 FOXJ3Q9UPW0 622 aa10.3□□□□□ -0.76
DDX55-210ENST00000543016 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 CLDN25C9JDP6 229 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 H3BSH0 61 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RP2O75695 350 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 SC5DO75845 299 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 ARL6IP5O75915 188 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 INMTO95050 263 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 GRPP07492 148 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 ACAA1P09110 424 aaPredicted RBP10.29□□□□□ -0.76
DDX55-210ENST00000543016 SLC25A16P16260 332 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 CPT2P23786 658 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 COL8A2P25067 703 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 TGFBR2P37173 567 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RANBP1P43487 201 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 SOX2P48431 317 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RBP2P50120 134 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 GPM6AP51674 278 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 ZNF154Q13106 437 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RIN1Q13671 783 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 DOC2BQ14184 412 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 NEDD8Q15843 81 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 CEP78Q5JTW2 689 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 CCL17Q92583 94 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RAB1CQ92928 201 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 MUL1Q969V5 352 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 DERL3Q96Q80 235 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 OR14A2Q96R54 314 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 TMED9Q9BVK6 235 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 MRPS26Q9BYN8 205 aaKnown RBP10.29□□□□□ -0.76
DDX55-210ENST00000543016 PKIBQ9C010 78 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 TMEM138Q9NPI0 162 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 RNF7Q9UBF6 113 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 POLDIP2Q9Y2S7 368 aa10.29□□□□□ -0.76
DDX55-210ENST00000543016 SF3B6Q9Y3B4 125 aaKnown RBP10.29□□□□□ -0.76
DDX55-210ENST00000543016 TRDV1A0A1B0GX56 115 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 A6NIN4 97 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 A6NLC8 198 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 TMEM178BH3BS89 294 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 LMX1BO60663 402 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 CDC14BO60729 498 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 RGS9O75916 674 aaPredicted RBP10.28□□□□□ -0.76
DDX55-210ENST00000543016 IGFBP3P17936 291 aaPredicted RBP10.28□□□□□ -0.76
DDX55-210ENST00000543016 MPZP25189 248 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 AZGP1P25311 298 aaKnown RBP10.28□□□□□ -0.76
DDX55-210ENST00000543016 THBS2P35442 1172 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 MTCP1P56278 107 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 KCNJ8Q15842 424 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 SSX1Q16384 188 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 TIMM50Q3ZCQ8 353 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms