RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 RHBDL1O75783 438 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 PSG2P11465 335 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 IGLL1P15814 213 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 SPI1P17947 270 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 CFL1P23528 166 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 HSD11B1P28845 292 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 RRM2P31350 389 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 GABRA2P47869 451 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 NUDT2P50583 147 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 CRMP1Q14194 572 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 EIF2B1Q14232 305 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 TMEM185AQ8NFB2 350 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 OR52L1Q8NGH7 329 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 OR52H1Q8NGJ2 320 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 RNF133Q8WVZ7 376 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 PYURFQ96I23 114 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 SP140LQ9H930 580 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 IL20Q9NYY1 176 aa14.4□□□□□ -0.1
CLSTN3-214ENST00000542663 NDUFAB1O14561 156 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 GLRA1P23415 457 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 IFNGR2P38484 337 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 ERVFRD-1P60508 538 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 PSME3P61289 254 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 LINC01590Q5TEZ4 76 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 RPL13AP3Q6NVV1 102 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 LHFPL4Q7Z7J7 247 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 RNF148Q8N7C7 305 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 DTX3Q8N9I9 347 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 WFDC9Q8NEX5 89 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 OR5K1Q8NHB7 308 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 RNF170Q96K19 258 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 BTBD10Q9BSF8 475 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 ABHD6Q9BV23 337 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 WNT10AQ9GZT5 417 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 GORASP2Q9H8Y8 452 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 BRD7Q9NPI1 651 aa14.39□□□□□ -0.11
CLSTN3-214ENST00000542663 FAM90A8PA6NJQ4 464 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 VGLL3A8MV65 326 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 CST4P01036 141 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 RAB13P51153 203 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 Q6ZS46 218 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 KCTD8Q6ZWB6 473 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 FTMTQ8N4E7 242 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 PAPD5Q8NDF8 572 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 OR9Q2Q8NGE9 314 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 OR6K6Q8NGW6 343 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 SDSLQ96GA7 329 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 LYZL4Q96KX0 146 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 CDCA4Q9BXL8 241 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 OR10A2Q9H208 303 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 HEXA-AS1Q9H8Q6 139 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 TCF19Q9Y242 345 aa14.38□□□□□ -0.11
CLSTN3-214ENST00000542663 APOC1P02654 83 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 CD33P20138 364 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 OPRL1P41146 370 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 SLC25A1P53007 311 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 SNCBQ16143 134 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 PLA1AQ53H76 456 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 TMEM219Q86XT9 240 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 OR4Q3Q8NH05 313 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 PIGCQ92535 297 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 PGAM5Q96HS1 289 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 OR5M11Q96RB7 305 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 RGCCQ9H4X1 137 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 ABCB9Q9NP78 766 aa14.37□□□□□ -0.11
CLSTN3-214ENST00000542663 A6NDX4 124 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 FABP3P05413 133 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 CCL3L1P16619 93 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 COX7A1P24310 79 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 GPM6AP51674 278 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 CNN3Q15417 329 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 LDLRAD2Q5SZI1 272 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 TMEM200BQ69YZ2 307 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 ZNF770Q6IQ21 691 aaPredicted RBP14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 CPLX4Q7Z7G2 160 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 OR6N2Q8NGY6 317 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 OR51I2Q9H344 312 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 YY1AP1Q9H869 796 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 VIPAS39Q9H9C1 493 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 TBC1D23Q9NUY8 699 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 LRP12Q9Y561 859 aa14.36□□□□□ -0.11
CLSTN3-214ENST00000542663 HMGA2P52926 109 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 LGALS4P56470 323 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 TMEM95Q3KNT9 176 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 DMRTC1Q5HYR2 192 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 RASSF6Q6ZTQ3 369 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 HDXQ7Z353 690 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 ERI1Q8IV48 349 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 TIGD4Q8IY51 512 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 LINC00471Q8N535 108 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 CD177Q8N6Q3 437 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 INTS14Q96SY0 518 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 TSSK6Q9BXA6 273 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 MED20Q9H944 212 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 IL1RAPQ9NPH3 570 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 LYVE1Q9Y5Y7 322 aa14.35□□□□□ -0.11
CLSTN3-214ENST00000542663 WI2-2373I1.2A0A1W2PRP0 233 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms