RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 SSR4P51571 173 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ZNF121P58317 390 aaPredicted RBP11□□□□□ -0.65
RNF4-222ENST00000541204 GPR85P60893 370 aa11□□□□□ -0.65
RNF4-222ENST00000541204 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
RNF4-222ENST00000541204 NAAAQ02083 359 aa11□□□□□ -0.65
RNF4-222ENST00000541204 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
RNF4-222ENST00000541204 SLC25A53Q5H9E4 307 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ZNF585AQ6P3V2 769 aa11□□□□□ -0.65
RNF4-222ENST00000541204 PGAP1Q75T13 922 aa11□□□□□ -0.65
RNF4-222ENST00000541204 NAA40Q86UY6 237 aa11□□□□□ -0.65
RNF4-222ENST00000541204 RPS19BP1Q86WX3 136 aaKnown RBP11□□□□□ -0.65
RNF4-222ENST00000541204 NOXO1Q8NFA2 376 aa11□□□□□ -0.65
RNF4-222ENST00000541204 OR2Y1Q8NGV0 311 aa11□□□□□ -0.65
RNF4-222ENST00000541204 OR2AJ1Q8NGZ0 328 aa11□□□□□ -0.65
RNF4-222ENST00000541204 OR51F2Q8NH61 342 aa11□□□□□ -0.65
RNF4-222ENST00000541204 OR10C1Q96KK4 312 aa11□□□□□ -0.65
RNF4-222ENST00000541204 UCN2Q96RP3 112 aa11□□□□□ -0.65
RNF4-222ENST00000541204 GPER1Q99527 375 aa11□□□□□ -0.65
RNF4-222ENST00000541204 ST6GALNAC5Q9BVH7 336 aa11□□□□□ -0.65
RNF4-222ENST00000541204 LOC102723996A0A087X1L8 192 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 A0A1W2PNV4 684 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 ETV2O00321 342 aaPredicted RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 SDCBPO00560 298 aaPredicted RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 GSTP1P09211 210 aaKnown RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 ZNF17P17021 662 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 PVALBP20472 110 aaPredicted RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 VAX1Q5SQQ9 334 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 OPN5Q6U736 354 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 TMEM105Q8N8V8 129 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 KCNG3Q8TAE7 436 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 MAFIPQ8WZ33 124 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 CNTNAP3BQ96NU0 1288 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 RTBDNQ9BSG5 229 aaPredicted RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 ARRDC1-AS1Q9H2J1 176 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 METTL8Q9H825 291 aaKnown RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 RPL35P42766 123 aaKnown RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 AKR1D1P51857 326 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 ARFRP1Q13795 201 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 C10orf91Q5T1B1 145 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 FADS6Q8N9I5 356 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 OR5D18Q8NGL1 313 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 OR5H2Q8NGV7 314 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 ZNF700Q9H0M5 742 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 HRH4Q9H3N8 390 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 RAB18Q9NP72 206 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 DKKL1Q9UK85 242 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 ANAPC10Q9UM13 185 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 FAM96BQ9Y3D0 163 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 A0A0G2JMM0 328 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 A0A1W2PPB8 328 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 A0A1W2PRS3 328 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 KIR3DP1A8MWS1 328 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 TCN2P20062 427 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 GLRA1P23415 457 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 NPBWR1P48145 328 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 RAB32Q13637 225 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 EXT1Q16394 746 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 PRSS54Q6PEW0 395 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 DRAM2Q6UX65 266 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 OR13G1Q8NGZ3 307 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 CPNE2Q96FN4 548 aaPredicted RBP10.99□□□□□ -0.65
RNF4-222ENST00000541204 PROK2Q9HC23 129 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 MMP26Q9NRE1 261 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 GSKIPQ9P0R6 139 aa10.99□□□□□ -0.65
RNF4-222ENST00000541204 TNRC6BQ9UPQ9 1833 aaKnown RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 AMY2BP19961 511 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 GABREP78334 506 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 RSPO4Q2I0M5 234 aaPredicted RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 SLC23A3Q6PIS1 610 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 SPAG16Q8N0X2 631 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 NPRL2Q8WTW4 380 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 ZNF385AQ96PM9 386 aaKnown RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 CDC6Q99741 560 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 UQCC1Q9NVA1 299 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 PISDQ9UG56 409 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 CARHSP1Q9Y2V2 147 aaKnown RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 MFNGO00587 321 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 TNFSF11O14788 317 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 FPR2P25090 351 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 EIF1P41567 113 aaKnown RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 PEAR1Q5VY43 1037 aaPredicted RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 FAM57BQ71RH2 274 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 FOXRED2Q8IWF2 684 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 LRRC18Q8N456 261 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 OR56B1Q8NGI3 324 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 OCSTAMPQ9BR26 566 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 MOB1AQ9H8S9 216 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 LPAR3Q9UBY5 353 aa10.98□□□□□ -0.65
RNF4-222ENST00000541204 KLF2Q9Y5W3 355 aaPredicted RBP10.98□□□□□ -0.65
RNF4-222ENST00000541204 IGKV1-9A0A0C4DH69 117 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 C5orf63A6NC05 138 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 AQP7P3A6NL99 342 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 E9PLN8 166 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms