RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RPS6KA3P51812 740 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 AGBL2Q5U5Z8 902 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 ZDHHC21Q8IVQ6 265 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 LINC00471Q8N535 108 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 CYB561A3Q8NBI2 242 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 MALSU1Q96EH3 234 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 SDSLQ96GA7 329 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 C7orf26Q96N11 449 aa9.77□□□□□ -0.85
SVIP-205ENST00000533774 TBL2Q9Y4P3 447 aaKnown RBP9.77□□□□□ -0.85
SVIP-205ENST00000533774 MEX3AA1L020 520 aaKnown RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 TBX1O43435 398 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 IFNA14P01570 189 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 AMY1AP04745 511 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 AMY2AP04746 511 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 IFNW1P05000 195 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 CD24P25063 80 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 IFNA8P32881 189 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 GSK3AP49840 483 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 LUMP51884 338 aaPredicted RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 RPL31P62899 125 aaKnown RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 SEC23BQ15437 767 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 FAM76BQ5HYJ3 339 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 ZNF626Q68DY1 528 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 UNQ9370/PRO34162Q6UXP9 181 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 PRSS45Q7RTY3 260 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 DCXRQ7Z4W1 244 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 CD177Q8N6Q3 437 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 Q8NFD4 153 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 OR4X2Q8NGF9 303 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 HPSE2Q8WWQ2 592 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 OR5P3Q8WZ94 311 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 LZICQ8WZA0 190 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 FOXRED1Q96CU9 486 aaPredicted RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 REEP6Q96HR9 211 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 DUX3Q96PT4 197 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 P2RX4Q99571 388 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 KCNJ15Q99712 375 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 COPS4Q9BT78 406 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 PAPOLGQ9BWT3 736 aaKnown RBP9.76□□□□□ -0.85
SVIP-205ENST00000533774 NDEL1Q9GZM8 345 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 USE1Q9NZ43 259 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 TMEM5Q9Y2B1 443 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 HILPDAQ9Y5L2 63 aa9.76□□□□□ -0.85
SVIP-205ENST00000533774 UNC119BA6NIH7 251 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 ZNF850A8MQ14 1090 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 C17orf98A8MV24 154 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 RENP00797 406 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 RPLP1P05386 114 aaKnown RBP9.75□□□□□ -0.85
SVIP-205ENST00000533774 SNRNP70P08621 437 aaKnown RBP9.75□□□□□ -0.85
SVIP-205ENST00000533774 GLRA1P23415 457 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 ACKR3P25106 362 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 CHATP28329 748 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 GNALP38405 381 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 ENTPD1P49961 510 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 CAPZA1P52907 286 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 RPL23AP62750 156 aaKnown RBP9.75□□□□□ -0.85
SVIP-205ENST00000533774 TNP2Q05952 138 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 PRDX4Q13162 271 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 ABCA11PQ4W5N1 156 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 OR2T27Q8NH04 317 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 MICU1Q9BPX6 476 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 TMEM120AQ9BXJ8 343 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 NSRP1Q9H0G5 558 aaKnown RBP9.75□□□□□ -0.85
SVIP-205ENST00000533774 BRD7Q9NPI1 651 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 CENPMQ9NSP4 180 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 LRP12Q9Y561 859 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
SVIP-205ENST00000533774 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 TRBV4-1A0A0J9YWV2 114 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 ARPC3O15145 178 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 RAMP3O60896 148 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 MAGOHP61326 146 aaKnown RBP9.74□□□□□ -0.85
SVIP-205ENST00000533774 SLC34A1Q06495 639 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 CYLC2Q14093 348 aaPredicted RBP9.74□□□□□ -0.85
SVIP-205ENST00000533774 TIGD6Q17RP2 521 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 ZNF770Q6IQ21 691 aaPredicted RBP9.74□□□□□ -0.85
SVIP-205ENST00000533774 ERICH5Q6P6B1 374 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 SMARCD3Q6STE5 483 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 MEPCEQ7L2J0 689 aaKnown RBP9.74□□□□□ -0.85
SVIP-205ENST00000533774 RRM2BQ7LG56 351 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 THAP5Q7Z6K1 395 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 ZNF329Q86UD4 541 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 OR11H6Q8NGC7 330 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 OR8J3Q8NGG0 315 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 OR51L1Q8NGJ5 315 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 SLAMF6Q96DU3 332 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 RTL8AQ9BWD3 113 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 MYLK2Q9H1R3 596 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 RABEP2Q9H5N1 569 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 PALMDQ9NP74 551 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 NKIRAS1Q9NYS0 192 aa9.74□□□□□ -0.85
SVIP-205ENST00000533774 NKX1-2Q9UD57 310 aaPredicted RBP9.74□□□□□ -0.85
SVIP-205ENST00000533774 KCNG2Q9UJ96 466 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms