RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 OR14A2Q96R54 314 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 CCL19Q99731 98 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 MICU1Q9BPX6 476 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 ADAT1Q9BUB4 502 aaKnown RBP10.63□□□□□ -0.71
COPB1-208ENST00000532088 RAB1BQ9H0U4 201 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 C14orf119Q9NWQ9 140 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 CKLFQ9UBR5 152 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 IL19Q9UHD0 177 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 SSR3Q9UNL2 185 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 ZNF850A8MQ14 1090 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 PIN1P1O15428 100 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 SULT1B1O43704 296 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 IGHV1-46P01743 117 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 PF4P02776 101 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 ALDOBP05062 364 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 H2AFB1P0C5Y9 115 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 H2AFB2P0C5Z0 115 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 PRF1P14222 555 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 ATF1P18846 271 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CA6P23280 308 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 SOX2P48431 317 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
COPB1-208ENST00000532088 FUT6P51993 359 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 PPP3R1P63098 170 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 MRPS11P82912 194 aaKnown RBP10.62□□□□□ -0.71
COPB1-208ENST00000532088 FABP5Q01469 135 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 TESK1Q15569 626 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 FAM76BQ5HYJ3 339 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CDH26Q8IXH8 852 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 OR8S1Q8NH09 359 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 TMEM203Q969S6 136 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 ELMOD3Q96FG2 381 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CPNE2Q96FN4 548 aaPredicted RBP10.62□□□□□ -0.71
COPB1-208ENST00000532088 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 RTL8AQ9BWD3 113 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CACNG6Q9BXT2 260 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 EGLN1Q9GZT9 426 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 MSL2Q9HCI7 577 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 ZNF701Q9NV72 531 aaPredicted RBP10.62□□□□□ -0.71
COPB1-208ENST00000532088 SLC7A11Q9UPY5 501 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
COPB1-208ENST00000532088 IFNL4K9M1U5 179 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 SPRY3O43610 288 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 LMX1BO60663 402 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 NAT2P11245 290 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 TNFRSF1AP19438 455 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 RAB3AP20336 220 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 GNG3P63215 75 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 UBE2V2Q15819 145 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 HSD17B12Q53GQ0 312 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 PLCXD3Q63HM9 321 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 HIST2H2BCQ6DN03 193 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 ASPHD2Q6ICH7 369 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 LHFPL2Q6ZUX7 228 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 MOB3CQ70IA8 216 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 ANKRD13BQ86YJ7 626 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 NKAIN3Q8N8D7 197 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 HPSE2Q8WWQ2 592 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 TRMT61AQ96FX7 289 aaKnown RBP10.61□□□□□ -0.71
COPB1-208ENST00000532088 BCL7BQ9BQE9 202 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 TLNRD1Q9H1K6 362 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 NOX4Q9NPH5 578 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 TMEM138Q9NPI0 162 aa10.61□□□□□ -0.71
COPB1-208ENST00000532088 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 ROS1P08922 2347 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 TRAV1-2A0A0B4J238 106 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 IGKV1-9A0A0C4DH69 117 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 PQLC2LA1A4F0 135 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 TRIM64BA6NI03 449 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 H3BSH0 61 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 SRMP19623 302 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 GADD45AP24522 165 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 BDKRB2P30411 391 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 MAGEB1P43366 347 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 RANBP1P43487 201 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 TNFAIP6P98066 277 aaPredicted RBP10.6□□□□□ -0.71
COPB1-208ENST00000532088 BLMHQ13867 455 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 ZNF181Q2M3W8 571 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 OR1M1Q8NGA1 313 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 TMIGD2Q96BF3 282 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 BORCS8Q96FH0 119 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 FUNDC2Q9BWH2 189 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
COPB1-208ENST00000532088 TCF7L1Q9HCS4 588 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
COPB1-208ENST00000532088 GPR173Q9NS66 373 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 SNTG1Q9NSN8 517 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 BEX4Q9NWD9 120 aaPredicted RBP10.6□□□□□ -0.71
COPB1-208ENST00000532088 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
COPB1-208ENST00000532088 TAS2R4Q9NYW5 299 aa10.6□□□□□ -0.71
COPB1-208ENST00000532088 ARFGEF3Q5TH69 2177 aa10.59□□□□□ -0.71
COPB1-208ENST00000532088 DSCAMO60469 2012 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms