RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 NAV1Q8NEY1 1877 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CHD4Q14839 1912 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 IGHV4-28A0A0C4DH34 117 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 OR6C6A6NF89 314 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 TMX2-CTNND1H3BSU7 103 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 HAND1O96004 215 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 IFNGP01579 166 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 C4BPBP20851 252 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CA6P23280 308 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CASP1P29466 404 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 RPA3P35244 121 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ELK3P41970 407 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 FAM53BQ14153 422 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 FAM71E1Q6IPT2 247 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF767PQ75MW2 155 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 SPICQ8N5J4 248 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 TRUB1Q8WWH5 349 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 TMEM234Q8WY98 164 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 DUX3Q96PT4 197 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 OR5M11Q96RB7 305 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 MED18Q9BUE0 208 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF385DQ9H6B1 395 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CLMPQ9H6B4 373 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 METTL17Q9H7H0 456 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 TMEM138Q9NPI0 162 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 TAS2R16Q9NYV7 291 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CES1P1Q9UKY3 287 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 SNX10Q9Y5X0 201 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 MYH10P35580 1976 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 NWD2Q9ULI1 1742 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF724A8MTY0 619 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 TAAR5O14804 337 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FOXS1O43638 330 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 BUB3O43684 328 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 RP2O75695 350 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 EIF3GO75821 320 aaKnown RBP eCLIP4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 TSPAN15O95858 294 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PYCR1P32322 319 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ARL2P36404 184 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 GSK3BP49841 420 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 UBE2E1P51965 193 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 RAB25P57735 213 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 BTN3A2P78410 334 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FOXF2Q12947 444 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 GRK1Q15835 563 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ARHGAP11BQ3KRB8 267 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FAM153CQ494X1 144 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 NANOGP8Q6NSW7 305 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 CTAGE3PQ8IX95 158 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PRR22Q8IZ63 422 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FBXL14Q8N1E6 418 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 STOML3Q8TAV4 291 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ZMYND19Q96E35 227 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C14orf144Q96I85 54 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 UBE2E2Q96LR5 201 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PPP3R2Q96LZ3 170 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 VAT1Q99536 393 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 MRPL45Q9BRJ2 306 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 MS4A6AQ9H2W1 248 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 MIXL1Q9H2W2 232 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ADGRL4Q9HBW9 690 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 B3GAT2Q9NPZ5 323 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 SLC7A11Q9UPY5 501 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C11orf98E9PRG8 122 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C15orf65H3BRN8 121 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 I3L4J1 428 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FAM189A1O60320 539 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 CNMDO75829 334 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 SDC1P18827 310 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 F2RP25116 425 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 LIM2P55344 173 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ARG2P78540 354 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF154Q13106 437 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 WDR74Q6RFH5 385 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FAM220AQ7Z4H9 259 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PIANPQ8IYJ0 282 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ZADH2Q8N4Q0 377 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 SLC26A10Q8NG04 563 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 OR52B6Q8NGF0 335 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 OR6F1Q8NGZ6 308 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 RPLP0P6Q8NHW5 317 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C11orf40Q8WZ69 217 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 TMBIM1Q969X1 311 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 FGGYQ96C11 551 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 ZHX1-C8orf76Q96EF9 292 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C17orf77Q96MU5 243 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 RCHY1Q96PM5 261 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PRORYQ9H606 182 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 PLEKHA3Q9HB20 300 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 TMEM181Q9P2C4 612 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
ECHDC1-222ENST00000531967 A0A0G2JMP0 313 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms