RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RNF182Q8N6D2 247 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 NDNFQ8TB73 568 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 FAM172AQ8WUF8 416 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 MAFIPQ8WZ33 124 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SGTBQ96EQ0 304 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PPP3R2Q96LZ3 170 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SERPINB11Q96P15 392 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SPIN2AQ99865 258 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SPIN2BQ9BPZ2 258 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 COPS4Q9BT78 406 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 TOLLIPQ9H0E2 274 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 OR51M1Q9H341 326 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 RGCCQ9H4X1 137 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CYP3A43Q9HB55 503 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 KCNJ16Q9NPI9 418 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 IFT46Q9NQC8 304 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 XPNPEP1Q9NQW7 623 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 FGFR1OP2Q9NVK5 253 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 LSM7Q9UK45 103 aaKnown RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 CCDC141Q6ZP82 1450 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 ARAP1Q96P48 1450 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SHANK2Q9UPX8 1470 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 LAMC1P11047 1609 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 MYH9P35579 1960 aaKnown RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 TTC37Q6PGP7 1564 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 IGHV3-74A0A0B4J1X5 117 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 TRAV39A0A0B4J263 110 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 IGHV5-10-1A0A0J9YXX1 117 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ZNF816-ZNF321PA0A0X1KG74 233 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 FAM92AA1XBS5 289 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 MGAT4DA6NG13 374 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 RFPL4AA6NLU0 287 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 OR2AT4A6NND4 320 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 LINC00587B1AMM8 73 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 RFPL4AL1F8VTS6 287 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 K7EM74 188 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 TOX3O15405 576 aaPredicted RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 COCHO43405 550 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ZNF207O43670 478 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 DPM1O60762 260 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 NDUFS6O75380 124 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 BANF1O75531 89 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CCNE2O96020 404 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CST1P01037 141 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CDK1P06493 297 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 FBP1P09467 338 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CTXN2P0C2S0 81 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 UQCRFS1P1P0C7P4 283 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 HSPD1P10809 573 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 NPY1RP25929 384 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 PSMB6P28072 239 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 HSD11B1P28845 292 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 NAA10P41227 235 aaPredicted RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 ACTR1BP42025 376 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CDC34P49427 236 aaPredicted RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 PRMT2P55345 433 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 MAGOHP61326 146 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 XIAPP98170 497 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 STX4Q12846 297 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ECH1Q13011 328 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ERCC8Q13216 396 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 SHHQ15465 462 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 UBE2SQ16763 222 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 AKIRIN2Q53H80 203 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 SPANXN2Q5MJ10 180 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 RPL13AP3Q6NVV1 102 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CERS6Q6ZMG9 384 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 TEX43Q6ZNM6 134 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ZNF767PQ75MW2 155 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 WDR86Q86TI4 376 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CYP4Z1Q86W10 505 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 FAM58AQ8N1B3 248 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 NECAB1Q8N987 351 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 OR10R2Q8NGX6 335 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 C22orf15Q8WYQ4 148 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 MCUR1Q96AQ8 359 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 DUS3LQ96G46 650 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 CAPZA3Q96KX2 299 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 PPP1R36Q96LQ0 422 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 PPP1R2P1Q96PQ5 205 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 SERPINI1Q99574 410 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 ZNF2Q9BSG1 426 aaPredicted RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 MND1Q9BWT6 205 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 POTEKPQ9BYX7 375 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 LINC00597Q9H2U6 94 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 TREX1Q9NSU2 369 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CCDC59Q9P031 241 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 NAGKQ9UJ70 344 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 CSDC2Q9Y534 153 aaKnown RBP2.48□□□□□ -2.01
CTR9-204ENST00000529355 NUBP2Q9Y5Y2 271 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 VPS8Q8N3P4 1428 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 AKAP11Q9UKA4 1901 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 COL1A2P08123 1366 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 MED23Q9ULK4 1368 aa2.48□□□□□ -2.01
CTR9-204ENST00000529355 LMTK2Q8IWU2 1503 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 CFAP43Q8NDM7 1665 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 MYO5BQ9ULV0 1848 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RAPGEF2Q9Y4G8 1499 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TMEM131LA2VDJ0 1609 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms