RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF91Q05481 1191 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 PAX8Q06710 450 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 TMED1Q13445 227 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 RCN1Q15293 331 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 SMN1Q16637 294 aaKnown RBP11.06□□□□□ -0.64
VEGFA-219ENST00000518824 FAM76BQ5HYJ3 339 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 WDR38Q5JTN6 314 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 TEX36Q5VZQ5 186 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 Q6ZSR3 168 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 C10orf67Q8IYJ2 551 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 RDH10Q8IZV5 341 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 BCL6BQ8N143 479 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-219ENST00000518824 RFKQ969G6 155 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 CCL13Q99616 98 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 ZNF649Q9BS31 505 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 RTL8AQ9BWD3 113 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 OR51I2Q9H344 312 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 OCEL1Q9H607 264 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 RNPEPL1Q9HAU8 725 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 ZNF391Q9UJN7 358 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 GNG8Q9UK08 70 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 MYRFQ9Y2G1 1151 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 SNX5Q9Y5X3 404 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 V9GYS6 101 aa11.06□□□□□ -0.64
VEGFA-219ENST00000518824 TRAV38-1A0A0B4J264 116 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 SRRM5B3KS81 715 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 DBTP11182 482 aaKnown RBP11.05□□□□□ -0.64
VEGFA-219ENST00000518824 PEX2P28328 305 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 NANOS3P60323 173 aaKnown RBP11.05□□□□□ -0.64
VEGFA-219ENST00000518824 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 RIPPLY1Q0D2K3 151 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 CEACAM21Q3KPI0 293 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 PLCXD3Q63HM9 321 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 TMEM42Q69YG0 159 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 BATF2Q8N1L9 274 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 FAM216BQ8N7L0 139 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 RAB40AQ8WXH6 277 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 ZNF488Q96MN9 340 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 TECTBQ96PL2 329 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 SLC6A7Q99884 636 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 CLN8Q9UBY8 286 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 OR5V1Q9UGF6 321 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.05□□□□□ -0.643e-7■■□□□ 12.6
VEGFA-219ENST00000518824 EXOGQ9Y2C4 368 aaKnown RBP11.05□□□□□ -0.64
VEGFA-219ENST00000518824 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
VEGFA-219ENST00000518824 TMEM210A6NLX4 147 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 DVL1O14640 695 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 SLC16A6O15403 523 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 SYNGR1O43759 233 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
VEGFA-219ENST00000518824 SULT1C4O75897 302 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 NRASP01111 189 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 ATP6V1B1P15313 513 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 CCL1P22362 96 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 GATA3P23771 443 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 CFHR2P36980 270 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 ZSCAN26Q16670 478 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 CDONQ4KMG0 1287 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 MEDAGQ5VYS4 303 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 NLRC3Q7RTR2 1065 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 THAP5Q7Z6K1 395 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 LHFPL3Q86UP9 236 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 FTMTQ8N4E7 242 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 OR10AC1Q8NH08 325 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 NANPQ8TBE9 248 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 STMN2Q93045 179 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 NUDT16L1Q9BRJ7 211 aaKnown RBP11.04□□□□□ -0.64
VEGFA-219ENST00000518824 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 ISG20L2Q9H9L3 353 aaKnown RBP11.04□□□□□ -0.64
VEGFA-219ENST00000518824 FRRS1LQ9P0K9 344 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 ZNF69Q9UC07 566 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 ENPP5Q9UJA9 477 aa11.04□□□□□ -0.64
VEGFA-219ENST00000518824 KIR2DS1A0A191URI9 304 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 DAPL1A0PJW8 107 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 TMPRSS2O15393 492 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 TCF21O43680 179 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 GNG3P63215 75 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 SNCBQ16143 134 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 STUMQ69YW2 141 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 HAGHLQ6PII5 290 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-219ENST00000518824 DOK3Q7L591 496 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 OR2G2Q8NGZ5 317 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 CNIH3Q8TBE1 160 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 NPRL2Q8WTW4 380 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 AQP3Q92482 292 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 PELI1Q96FA3 418 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 C4orf36Q96KX1 117 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 HIST1H2AAQ96QV6 131 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 C19orf24Q9BVV8 132 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 SMPD3Q9NY59 655 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-219ENST00000518824 ERVK-18Q9QC07 812 aa11.03□□□□□ -0.64
VEGFA-219ENST00000518824 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 LOC107986453A0A1B0GWG9 222 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 PQLC2LA1A4F0 135 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 E9PI62 339 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 J3QLW9 94 aa11.02□□□□□ -0.65
VEGFA-219ENST00000518824 MTRF1O75570 445 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms