RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 SLC7A11Q9UPY5 501 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 PQLC2LA1A4F0 135 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 OR5B21A6NL26 309 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 SPRY3O43610 288 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 ERCC1P07992 297 aaPredicted RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 NAT2P11245 290 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 AZGP1P25311 298 aaKnown RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 SSTR2P30874 369 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 FUT6P51993 359 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 FAM76BQ5HYJ3 339 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 FOXB2Q5VYV0 432 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 C20orf204Q6ZNR8 217 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 TMEM200AQ86VY9 491 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 CDH26Q8IXH8 852 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 NKAIN3Q8N8D7 197 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 OR2Z1Q8NG97 314 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 OR10AD1Q8NGE0 317 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 OR52N4Q8NGI2 321 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 OR8S1Q8NH09 359 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 NPRL2Q8WTW4 380 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 C12orf43Q96C57 262 aaKnown RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 ELMOD3Q96FG2 381 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 RNF170Q96K19 258 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 DIRC2Q96SL1 478 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 GFI1Q99684 422 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 MICU1Q9BPX6 476 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 RTL8AQ9BWD3 113 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 CXXC4Q9H2H0 198 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.7
PDPN-210ENST00000513143 RSL24D1Q9UHA3 163 aaKnown RBP10.65□□□□□ -0.7
PDPN-210ENST00000513143 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 F5H5P2 479 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 PDCD5O14737 125 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 MAGEB3O15480 346 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 CDRT1O95170 752 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 IL1AP01583 271 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 CD55P08174 381 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 OCMP0CE72 109 aaPredicted RBP10.64□□□□□ -0.71
PDPN-210ENST00000513143 RAB3BP20337 219 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 THBS2P35442 1172 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 RPS19P39019 145 aaKnown RBP10.64□□□□□ -0.71
PDPN-210ENST00000513143 CD200P41217 278 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 PPOXP50336 477 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 GPM6AP51674 278 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 GNG3P63215 75 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 MAB21L1Q13394 359 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 CRIP3Q6Q6R5 217 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 LHFPL2Q6ZUX7 228 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 USP43Q70EL4 1123 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 LYPD6Q86Y78 171 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 CELF2-AS1Q8N7Q2 184 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 NDNFQ8TB73 568 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 TRMT10AQ8TBZ6 339 aaKnown RBP10.64□□□□□ -0.71
PDPN-210ENST00000513143 IGFBPL1Q8WX77 278 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 BORCS8Q96FH0 119 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 FAM192AQ9GZU8 254 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 C14orf119Q9NWQ9 140 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 LAMP3Q9UQV4 416 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 AK6Q9Y3D8 172 aaKnown RBP10.64□□□□□ -0.71
PDPN-210ENST00000513143 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
PDPN-210ENST00000513143 IGKV1-27A0A075B6S5 117 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 LOC100289279A0A1B0GTE1 492 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 FAM230AA0A1W2PPH8 454 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 TRIM64BA6NI03 449 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 PTBP3O95758 552 aaKnown RBP10.63□□□□□ -0.71
PDPN-210ENST00000513143 HCKP08631 526 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 CLEC2LP0C7M8 214 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 BMP4P12644 408 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 TNFSF4P23510 183 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 SERPINB10P48595 397 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 RBP2P50120 134 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 PSMD7P51665 324 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 ATP1B3P54709 279 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 MTCP1P56278 107 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 MXD1Q05195 221 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 SPCS2Q15005 226 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 KISS1Q15726 138 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 FAM209AQ5JX71 171 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 DDI2Q5TDH0 399 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 GLT8D1Q68CQ7 371 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 HIST2H2BCQ6DN03 193 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 WDR86Q86TI4 376 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 NR2C2APQ86WQ0 139 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 ZCCHC24Q8N2G6 241 aaKnown RBP10.63□□□□□ -0.71
PDPN-210ENST00000513143 FOXRED1Q96CU9 486 aaPredicted RBP10.63□□□□□ -0.71
PDPN-210ENST00000513143 SPACA5Q96QH8 159 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 DCSTAMPQ9H295 470 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 OR51I2Q9H344 312 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 METTL17Q9H7H0 456 aaPredicted RBP10.63□□□□□ -0.71
PDPN-210ENST00000513143 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms