RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TNFP01375 233 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD8AP01732 235 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 LGALS2P05162 132 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 IL6RP08887 468 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ACAA1P09110 424 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CSF1P09603 554 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 H2BFMP0C1H6 154 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 HLA-EP13747 358 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM11P17152 192 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ACKR3P25106 362 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD40P25942 277 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD82P27701 267 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CCR7P32248 378 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TAGLN2P37802 199 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 RPL35P42766 123 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 KIR3DL2P43630 455 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SULT1A2P50226 295 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 RPL30P62888 115 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ERHP84090 104 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SERF2P84101 59 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 FGFBP1Q14512 234 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 HLXQ14774 488 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF791Q3KP31 576 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 IFI44LQ53G44 452 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SPANXN3Q5MJ09 141 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLEC12AQ5QGZ9 265 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PVRIGQ6DKI7 326 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 C22orf42Q6IC83 251 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 H3F3CQ6NXT2 135 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 MBOAT1Q6ZNC8 495 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM182Q6ZP80 229 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC35D2Q76EJ3 337 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF627Q7L945 461 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 FAM219AQ8IW50 185 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SULF2Q8IWU5 870 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLIP4Q8N3C7 705 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC22A24Q8N4F4 322 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 C11orf42Q8N5U0 333 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZNF441Q8N8Z8 693 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SCCPDHQ8NBX0 429 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ADAD2Q8NCV1 583 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TMEM52Q8NDY8 209 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR5AP2Q8NGF4 316 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR5M8Q8NGP6 311 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZFAND1Q8TCF1 268 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZPLD1Q8TCW7 415 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 C17orf50Q8WW18 174 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ZCCHC14Q8WYQ9 949 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ROPN1LQ96C74 230 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC25A44Q96H78 314 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 MCEEQ96PE7 176 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CNN2Q99439 309 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC6A7Q99884 636 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 INPP5KQ9BT40 448 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 G6PC3Q9BUM1 346 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 WRAP53Q9BUR4 548 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 POLR2J3Q9H1A7 115 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TSPAN10Q9H1Z9 355 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR2AG1Q9H205 316 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR51V1Q9H2C8 321 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 RHOJQ9H4E5 214 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ANKRD19PQ9H560 264 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PROK2Q9HC23 129 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 OR2S2Q9NQN1 319 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 AP5S1Q9NUS5 200 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 FKBPLQ9UIM3 349 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 LAMP3Q9UQV4 416 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 WDR37Q9Y2I8 494 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 METTL12A8MUP2 240 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 EEF1E1-BLOC1S5C9J1V9 151 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 K7ERS5 55 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 DCTN6O00399 190 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CLDN5O00501 218 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ARPC5O15511 151 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 EEF1E1O43324 174 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PROM1O43490 865 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 EFNA2O43921 213 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PITX3O75364 302 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PTTG1O95997 202 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 HPP00738 406 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 KRASP01116 189 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TRBC1P01850 177 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 MT-ND4LP03901 98 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD3EP07766 207 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CD79AP11912 226 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 TYRP1P17643 537 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PSMB4P28070 264 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 GABRR2P28476 465 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 BDKRB1P46663 353 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CXCL12P48061 93 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 CAMLGP49069 296 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 UFM1P61960 85 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 SLC35B1P78383 322 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 POU6F2P78424 691 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 FABP5Q01469 135 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ST3GAL3Q11203 375 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 PRDX4Q13162 271 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 ADIRFQ15847 76 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 GABRA6Q16445 453 aa1.46□□□□□ -2.18
TRAPPC13-211ENST00000512009 GSG1Q2KHT4 349 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms