RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 M0QX08 132 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 EREGO14944 169 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 OR5F1O95221 314 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 TSPAN19P0C672 248 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 OR8U8P0C7N1 319 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 BMP2P12643 396 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HTR1DP28221 377 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 ACTA2P62736 377 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 ACTG2P63267 376 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 ACTC1P68032 377 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 ACTA1P68133 377 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HIST1H3AP68431 136 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 KRTAP27-1Q3LI81 207 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HIST2H3PS2Q5TEC6 136 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 NANOGP8Q6NSW7 305 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HIST2H3AQ71DI3 136 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 LINC00346Q8IVM7 164 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 FOXRED2Q8IWF2 684 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 STPG2Q8N412 459 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 OR10Z1Q8NGY1 313 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 OR2AJ1Q8NGZ0 328 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 TMEM239Q8WW34 195 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 LIPHQ8WWY8 451 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HSH2DQ96JZ2 352 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 Q96M85 177 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 ZIM3Q96PE6 472 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 MICU1Q9BPX6 476 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 HIPK2Q9H2X6 1198 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 GHITMQ9H3K2 345 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 WDR55Q9H6Y2 383 aaPredicted RBP5.6□□□□□ -1.51
VCAN-207ENST00000507162 KRCC1Q9NPI7 259 aaPredicted RBP5.6□□□□□ -1.51
VCAN-207ENST00000507162 MED31Q9Y3C7 131 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 NUPR2A6NF83 97 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 RFPL4AA6NLU0 287 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 RFPL4AL1F8VTS6 287 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 M0R135 149 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ITM2AO43736 263 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ABHD2P08910 425 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ZNF728P0DKX0 622 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ANOS1P23352 680 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 DLX6P56179 175 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 TAS2R41P59536 307 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 GPR50Q13585 617 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 HNF4GQ14541 408 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 RFX4Q33E94 735 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 AGBL2Q5U5Z8 902 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 LGALS9CQ6DKI2 356 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.51
VCAN-207ENST00000507162 THAP5Q7Z6K1 395 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 SLC35E3Q7Z769 313 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 HAPLN4Q86UW8 402 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 LYPD6Q86Y78 171 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 CALHM1Q8IU99 346 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 OR6V1Q8N148 313 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 LINC00471Q8N535 108 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ZNF781Q8N8C0 355 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 LRRC75AQ8NAA5 344 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 CYB561A3Q8NBI2 242 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 GPR32P1Q8NGA4 272 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 C4orf3Q8WVX3 66 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 SPTSSAQ969W0 71 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 SDSLQ96GA7 329 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ZNF799Q96GE5 643 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 OR5B12Q96R08 314 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 NSRP1Q9H0G5 558 aaKnown RBP5.59□□□□□ -1.51
VCAN-207ENST00000507162 SYT4Q9H2B2 425 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 AIG1Q9NVV5 245 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 SLAMF8Q9P0V8 285 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 DPM3Q9P2X0 92 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 KLK5Q9Y337 293 aaPredicted RBP5.59□□□□□ -1.51
VCAN-207ENST00000507162 MOB4Q9Y3A3 225 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 ADAM18Q9Y3Q7 739 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 HSPE1-MOB4S4R3N1 261 aa5.59□□□□□ -1.51
VCAN-207ENST00000507162 IGHV2-26A0A0B4J1V2 119 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 MAGEA13PA6NCF6 341 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 AP4M1O00189 453 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 SLC1A7O00341 560 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RIPK2O43353 540 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 TBX1O43435 398 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 FAM106CPP0CH98 169 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 SLC2A1P11166 492 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 IFI30P13284 250 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 PRDX2P32119 198 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 DDOSTP39656 456 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 RBM34P42696 430 aaKnown RBP5.58□□□□□ -1.52
VCAN-207ENST00000507162 SLC9A3P48764 834 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 PRKXP51817 358 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 SLC7A2P52569 658 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 ZNF616Q08AN1 781 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 KCNMB1Q16558 191 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 MESTQ5EB52 335 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 MAVSQ7Z434 540 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 OAFQ86UD1 273 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
VCAN-207ENST00000507162 SVOPQ8N4V2 548 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms