RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CUBNO60494 3623 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 DOK2O60496 412 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 HPGDSO60760 199 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 MTRF1O75570 445 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 UBL3O95164 117 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TGM6O95932 706 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 IGHV3-9P01782 118 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TTRP02766 147 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CRHP06850 196 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ERCC1P07992 297 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ACSM4P0C7M7 580 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CALCBP10092 127 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 COX5BP10606 129 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 B4GALT1P15291 398 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF32P17041 273 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 MPGP29372 298 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 GNALP38405 381 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 HTR5AP47898 357 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SLC6A9P48067 706 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 EVX1P49640 407 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CAPZA1P52907 286 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 PER3P56645 1201 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SCAND1P57086 179 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF121P58317 390 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ARPC4P59998 168 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TGFBR3Q03167 851 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 MFGE8Q08431 387 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CEP78Q5JTW2 689 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 FBXW9Q5XUX1 488 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 GLT8D1Q68CQ7 371 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ANKRD16Q6P6B7 361 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 XKRXQ6PP77 449 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CSPG4Q6UVK1 2322 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 DRAM2Q6UX65 266 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 FAM131AQ6UXB0 335 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 BAIAP2L2Q6UXY1 529 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 FAM57BQ71RH2 274 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 PGAP1Q75T13 922 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 LINGO2Q7L985 606 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 LRRC28Q86X40 367 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 COMMD2Q86X83 199 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 LAX1Q8IWV1 398 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SKA3Q8IX90 412 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CISD2Q8N5K1 135 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 GDPD1Q8N9F7 314 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 BOLLQ8N9W6 283 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR5AN1Q8NGI8 311 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR52H1Q8NGJ2 320 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR5D14Q8NGL3 314 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR5M9Q8NGP3 310 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR6K3Q8NGY3 331 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR10AC1Q8NH08 325 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR1F12Q8NHA8 337 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 LILRB4Q8NHJ6 448 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 GRPEL2Q8TAA5 225 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF671Q8TAW3 534 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SETD6Q8TBK2 473 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TRMT10AQ8TBZ6 339 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 HTRA1Q92743 480 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TRIM63Q969Q1 353 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 FGGYQ96C11 551 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 C10orf35Q96D05 121 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF799Q96GE5 643 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF486Q96H40 463 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 GPR137Q96N19 417 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 TAAR6Q96RI8 345 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 OR2H1Q9GZK4 316 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 MIXL1Q9H2W2 232 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 NEK6Q9HC98 313 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 PNRC2Q9NPJ4 139 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 DIABLOQ9NR28 239 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SLC17A5Q9NRA2 495 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF275Q9NSD4 429 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 CLCF1Q9UBD9 225 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ATPIF1Q9UII2 106 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 ZNF391Q9UJN7 358 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SPATA2Q9UM82 520 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 SPEF1Q9Y4P9 236 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 N6AMT1Q9Y5N5 214 aa4.59□□□□□ -1.67
HMGXB4-208ENST00000498325 A0A0G2JK05 382 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 A0A1B0GTI1 187 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 CIB4A0PJX0 185 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 IFITM5A6NNB3 132 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 H3BSH0 61 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 C19orf84I3L1E1 186 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 AIPO00170 330 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 KCNAB3O43448 404 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 SYNGR3O43761 229 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 LCATP04180 440 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 MAS1P04201 325 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 TPOP07202 933 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 SLC2A2P11168 524 aaPredicted RBP4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 IGFBP3P17936 291 aaPredicted RBP4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 ATF1P18846 271 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 RAB3AP20336 220 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 CCL1P22362 96 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 BDKRB2P30411 391 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 SSTR2P30874 369 aa4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 OTX1P32242 354 aaPredicted RBP4.58□□□□□ -1.68
HMGXB4-208ENST00000498325 DDOSTP39656 456 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms