RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LRFN1Q9P244 771 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 PFDN2Q9UHV9 154 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TIMM10BQ9Y5J6 103 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 DMDP11532 3685 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 NCKAP5O14513 1909 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 FOXI3A8MTJ6 420 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 CA11O75493 328 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 B4GALT1P15291 398 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF32P17041 273 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 FPR2P25090 351 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 AVPR2P30518 371 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 RGS19P49795 217 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 SNU13P55769 128 aaKnown RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 MTCP1P56278 107 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 LRRC37A5PQ49AS3 106 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF774Q6NX45 483 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM105Q8N8V8 129 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 ZBTB44Q8NCP5 570 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 CSNK2A3Q8NEV1 391 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM185AQ8NFB2 350 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 OR10K1Q8NGX5 313 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 THAP6Q8TBB0 222 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 LRRC20Q8TCA0 184 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 RBPMSQ93062 196 aaKnown RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 SEC22AQ96IW7 307 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 ST6GALNAC5Q9BVH7 336 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 FN3KRPQ9HA64 309 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 DEPPQ9NTK1 212 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TNFSF18Q9UNG2 199 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TECTAO75443 2155 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 VPS13AQ96RL7 3174 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 ZDBF2Q9HCK1 2354 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 A0A1B0GW55 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 OR6C6A6NF89 314 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CYTIPO60759 359 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 SPDEFO95238 335 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 LCATP04180 440 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 NMBP08949 121 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L2P0CJ85 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L3P0CJ86 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L4P0CJ87 422 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L5P0CJ88 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L6P0CJ89 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4L7P0CJ90 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 PRKACBP22694 351 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 NTF4P34130 210 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 HTR5AP47898 357 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 NPY4RP50391 375 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 GFRA1P56159 465 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CEACAM16Q2WEN9 425 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF660Q6AZW8 331 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 JMJD6Q6NYC1 403 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 SULF2Q8IWU5 870 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 C17orf50Q8WW18 174 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 METTL9Q9H1A3 318 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 RGCCQ9H4X1 137 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 GPR173Q9NS66 373 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 PLEKHJ1Q9NW61 149 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 ABI3Q9P2A4 366 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 B4GALT7Q9UBV7 327 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DUX4Q9UBX2 424 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 C5orf51A6NDU8 294 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 DBX1A6NMT0 343 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 FARS2O95363 451 aaKnown RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CSTBP04080 98 aaKnown RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 HPNP05981 417 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM225BP0DP42 221 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 ATP1B3P54709 279 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CLDN15P56746 228 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CHRFAM7AQ494W8 412 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 SPINK14Q6IE38 97 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 RGS7BPQ6MZT1 257 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 MYO7BQ6PIF6 2116 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 ACOT7LQ6ZUV0 252 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 PDZD9Q8IXQ8 264 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 INO80EQ8NBZ0 244 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-208ENST00000496116 OR5AP2Q8NGF4 316 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 OR5M9Q8NGP3 310 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 PSMF1Q92530 271 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CDC6Q99741 560 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 FAM173AQ9BQD7 235 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 GPR87Q9BY21 358 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 SPRY4Q9C004 299 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 EHFQ9NZC4 300 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 NUP50Q9UKX7 468 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
CMSS1-208ENST00000496116 LNP1A1A4G5 178 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 PMS2P1A4D2B8 440 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 C21orf140B9A014 251 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 C9orf172C9J069 976 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 M6PRP20645 277 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 GABRR1P24046 479 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 ACKR3P25106 362 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms