RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GNG3P63215 75 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 MRPS11P82912 194 aaKnown RBP12.33□□□□□ -0.44
BRCA1-223ENST00000494123 UBE2V2Q15819 145 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 SSX1Q16384 188 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-223ENST00000494123 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 MOGAT3Q86VF5 341 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF525Q8N782 197 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 OR1M1Q8NGA1 313 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 CCL17Q92583 94 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 MUL1Q969V5 352 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 BORCS8Q96FH0 119 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 FOXC2Q99958 501 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 MRPS26Q9BYN8 205 aaKnown RBP12.33□□□□□ -0.44
BRCA1-223ENST00000494123 FN3KRPQ9HA64 309 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 DLL4Q9NR61 685 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 TAS2R4Q9NYW5 299 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 TREM2Q9NZC2 230 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 A0A1W2PPK0 400 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 TRIM64CA6NLI5 447 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 LRRC30A6NM36 301 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 SULT1B1O43704 296 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-223ENST00000494123 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 IRF2P14316 349 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 ATF1P18846 271 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 RAB3AP20336 220 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 PRKACBP22694 351 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 COL8A2P25067 703 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 GATA4P43694 442 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 PDLIM4P50479 330 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 FUT6P51993 359 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 Q5PR19 223 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 DERL3Q96Q80 235 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
BRCA1-223ENST00000494123 MAGEB3O15480 346 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 HCKP08631 526 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 CSF3P09919 207 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 AZGP1P25311 298 aaKnown RBP12.31□□□□□ -0.44
BRCA1-223ENST00000494123 GP2P55259 537 aaKnown RBP12.31□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF154Q13106 437 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 INSL4Q14641 139 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 MPPED2Q15777 294 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 WDR86Q86TI4 376 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF420Q8TAQ5 688 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-223ENST00000494123 FAM168AQ92567 244 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 HPS1Q92902 700 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 YIPF5Q969M3 257 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 ORAI1Q96D31 301 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 NOX4Q9NPH5 578 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 C1orf123Q9NWV4 160 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 SF3B6Q9Y3B4 125 aaKnown RBP12.31□□□□□ -0.44
BRCA1-223ENST00000494123 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 DYSFO75923 2080 aa12.31□□□□□ -0.44
BRCA1-223ENST00000494123 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 IFNL4K9M1U5 179 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
BRCA1-223ENST00000494123 TGFBR2P37173 567 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 HAAOP46952 286 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 RBP2P50120 134 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 ATP1B3P54709 279 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 DSCR9P59020 149 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 CLEC12BQ2HXU8 276 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 SHEQ5VZ18 495 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 DNAAF1Q8NEP3 725 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 RPL3LQ92901 407 aaKnown RBP12.3□□□□□ -0.44
BRCA1-223ENST00000494123 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 FGF23Q9GZV9 251 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-223ENST00000494123 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
BRCA1-223ENST00000494123 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 CLDN25C9JDP6 229 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 GABRPO00591 440 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 CDIPTO14735 213 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 ALX3O95076 343 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 FABP5Q01469 135 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 HSD17B12Q53GQ0 312 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 PRSS57Q6UWY2 283 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 UNQ9370/PRO34162Q6UXP9 181 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 SCCPDHQ8NBX0 429 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 CPNE2Q96FN4 548 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms