RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 UNQ9370/PRO34162Q6UXP9 181 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 PARP16Q8N5Y8 322 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 OR1M1Q8NGA1 313 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 OR13F1Q8NGS4 319 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 ITLN1Q8WWA0 313 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 HPSE2Q8WWQ2 592 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 OR5P3Q8WZ94 311 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 C10orf35Q96D05 121 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 ITPKCQ96DU7 683 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 YIPF6Q96EC8 236 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 TRMT61AQ96FX7 289 aaKnown RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 DIRC2Q96SL1 478 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 RTL8AQ9BWD3 113 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 PPIL3Q9H2H8 161 aaKnown RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 TREM2Q9NZC2 230 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 CKLFQ9UBR5 152 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
LIME1-208ENST00000493265 STUB1Q9UNE7 303 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 SSR3Q9UNL2 185 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 SLC7A11Q9UPY5 501 aa14.59□□□□□ -0.07
LIME1-208ENST00000493265 TRAV8-7A0A075B6U6 113 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 ZNF732B4DXR9 585 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 GPX5O75715 221 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 NCR1O76036 304 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 MAS1P04201 325 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 HCKP08631 526 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 RAB3AP20336 220 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 THBS2P35442 1172 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 RPL5P46777 297 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 SRP9P49458 86 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 LSM3P62310 102 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 PPP3R1P63098 170 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 CNN3Q15417 329 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 PCGF3Q3KNV8 242 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 CEACAM21Q3KPI0 293 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 HSD17B12Q53GQ0 312 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 ASPHD2Q6ICH7 369 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 OR51A2Q8NGJ7 313 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 THRSPQ92748 146 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 RPL3LQ92901 407 aaKnown RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 MEGF10Q96KG7 1140 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 SPACA5Q96QH8 159 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 FUNDC2Q9BWH2 189 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 EGLN1Q9GZT9 426 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 FGF23Q9GZV9 251 aaPredicted RBP14.58□□□□□ -0.08
LIME1-208ENST00000493265 ABCB9Q9NP78 766 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 UFSP2Q9NUQ7 469 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 C14orf119Q9NWQ9 140 aa14.58□□□□□ -0.08
LIME1-208ENST00000493265 VPS13CQ709C8 3753 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 IGKV1-9A0A0C4DH69 117 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 TRDV1A0A1B0GX56 115 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 H7C417 338 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 OVOL3O00110 214 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 SULT1B1O43704 296 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 CDC14BO60729 498 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 SC5DO75845 299 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 HPXP02790 462 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 AZGP1P25311 298 aaKnown RBP14.57□□□□□ -0.08
LIME1-208ENST00000493265 CALRP27797 417 aaKnown RBP14.57□□□□□ -0.08
LIME1-208ENST00000493265 MAB21L1Q13394 359 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 GPR107Q5VW38 600 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 UTS2BQ765I0 119 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 SATL1Q86VE3 508 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 SPERTQ8NA61 448 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 IGFBPL1Q8WX77 278 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 RFT1Q96AA3 541 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 PERPQ96FX8 193 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 NKX3-1Q99801 234 aaPredicted RBP14.57□□□□□ -0.08
LIME1-208ENST00000493265 RNF167Q9H6Y7 350 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 SAP30LQ9HAJ7 183 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 TCF7L1Q9HCS4 588 aa14.57□□□□□ -0.08
LIME1-208ENST00000493265 LOC100289279A0A1B0GTE1 492 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 A0A1B0GWJ7 208 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 A6NLC8 198 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 LYNX1G3V0Z9 82 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 AIREO43918 545 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 ARL6IP5O75915 188 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 PLATP00750 562 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 UCHL1P09936 223 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 LYNX1P0DP58 116 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 MZT1Q08AG7 82 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 MPPED2Q15777 294 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 CARTPTQ16568 116 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 FAM209AQ5JX71 171 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 CD200R1LQ6Q8B3 271 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 WDR86Q86TI4 376 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 MOGAT3Q86VF5 341 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 OR5A2Q8NGI9 324 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 BORCS8Q96FH0 119 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 SLITRK2Q9H156 845 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 TXNL4BQ9NX01 149 aaKnown RBP14.56□□□□□ -0.08
LIME1-208ENST00000493265 IL19Q9UHD0 177 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 DNHD1Q96M86 4753 aa14.56□□□□□ -0.08
LIME1-208ENST00000493265 OR5B21A6NL26 309 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 MAGEB3O15480 346 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 CD55P08174 381 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ADH4P08319 380 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 IGFBP3P17936 291 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms