RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 GPR173Q9NS66 373 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 SLC7A11Q9UPY5 501 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 YLPM1P49750 1951 aaKnown RBP11.26□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF732B4DXR9 585 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 RP2O75695 350 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 GPX5O75715 221 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 GRPP07492 148 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 ATF1P18846 271 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 PRKACBP22694 351 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 MAPK3P27361 379 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-207ENST00000487645 THBS2P35442 1172 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 CFHR2P36980 270 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 SOX2P48431 317 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 FUT6P51993 359 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 Q5PR19 223 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 SYT6Q5T7P8 510 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-207ENST00000487645 KCTD8Q6ZWB6 473 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 OR1M1Q8NGA1 313 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 Q8TCH9 128 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 CCL17Q92583 94 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 DVL3Q92997 716 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-207ENST00000487645 TMEM106AQ96A25 262 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 SPSB1Q96BD6 273 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 TLNRD1Q9H1K6 362 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 OR51I2Q9H344 312 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 ITGB1BP2Q9UKP3 347 aa11.25□□□□□ -0.61
COL4A6-207ENST00000487645 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
COL4A6-207ENST00000487645 TRBV5-7A0A0A0MS05 114 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 PQLC2LA1A4F0 135 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 LRP5LA4QPB2 252 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 LRRC30A6NM36 301 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 CDC14BO60729 498 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 SC5DO75845 299 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 INMTO95050 263 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-207ENST00000487645 PSMB9P28065 219 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 GABRA5P31644 462 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 PMELP40967 661 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 GPM6AP51674 278 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF154Q13106 437 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 RIN1Q13671 783 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 CNN3Q15417 329 aaKnown RBP11.24□□□□□ -0.61
COL4A6-207ENST00000487645 MPPED2Q15777 294 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 ACSM3Q53FZ2 586 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF529Q6P280 563 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 MOGAT3Q86VF5 341 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF573Q86YE8 665 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 KRTAP1-3Q8IUG1 177 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 OR13C5Q8NGS8 318 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 OR11L1Q8NGX0 322 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 C10orf105Q8TEF2 133 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 HPS1Q92902 700 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 TMED9Q9BVK6 235 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 FGF23Q9GZV9 251 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-207ENST00000487645 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 AKAP9Q99996 3911 aa11.24□□□□□ -0.61
COL4A6-207ENST00000487645 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 MAGEA13PA6NCF6 341 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 CCRL2O00421 344 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 SULT1B1O43704 296 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 FSTL3O95633 263 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 ALDOBP05062 364 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 GALP22466 123 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 TGFBR2P37173 567 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 NEDD8Q15843 81 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 SSX1Q16384 188 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 PRAMEF6Q5VXH4 476 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 PEG10Q86TG7 708 aaKnown RBP11.23□□□□□ -0.61
COL4A6-207ENST00000487645 C1orf87Q8N0U7 546 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 SCCPDHQ8NBX0 429 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 MUL1Q969V5 352 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 DERL3Q96Q80 235 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 OR14A2Q96R54 314 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 UFSP2Q9NUQ7 469 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 TREM2Q9NZC2 230 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 CKLFQ9UBR5 152 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 FOXJ3Q9UPW0 622 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
COL4A6-207ENST00000487645 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 FAM230AA0A1W2PPH8 454 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 A6NLC8 198 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 CLDN25C9JDP6 229 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 MAGEB3O15480 346 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 LHBP01229 141 aa11.22□□□□□ -0.61
COL4A6-207ENST00000487645 ACAA1P09110 424 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms