RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 M1APQ8TC57 530 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 HINT2Q9BX68 163 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 HES7Q9BYE0 225 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 PLXNB3Q9ULL4 1909 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 MEIKINA0A087WXM9 373 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 IGHV1-45A0A0A0MS14 117 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 A0A0G2JK05 382 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TOR1AO14656 332 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 DHRS3O75911 302 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 NXPH2O95156 264 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 GPM6AP51674 278 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 RAB2AP61019 212 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 RPS11P62280 158 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 MC2RQ01718 297 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 WDR5BQ86VZ2 330 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TMEM229BQ8NBD8 167 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF519Q8TB69 540 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ZC3HAV1LQ96H79 300 aaKnown RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 CMTM3Q96MX0 182 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 A0A1W2PPC1 479 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 F8W036 122 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 NME2P22392 152 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 CAMLGP49069 296 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 BLOC1S1P78537 153 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TERB2Q8NHR7 220 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 K7EPK0 472 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 IFI6P09912 130 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 MEOX1P50221 254 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF468Q5VIY5 522 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ZSCAN1Q8NBB4 408 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 TMEM104Q8NE00 496 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 OR56B2PQ8NGI1 322 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ZPBPQ9BS86 351 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 WDR54Q9H977 334 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 U3KQ87 197 aa11.68□□□□□ -0.54
HMGN1-216ENST00000486741 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
HMGN1-216ENST00000486741 ITGB2P05107 769 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 GLRA1P23415 457 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 FCGR2CP31995 323 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 GABRA2P47869 451 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 MLF1P58340 268 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CLDN23Q96B33 292 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SOX7Q9BT81 388 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 A0A0D9SG52 128 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 OR6C6A6NF89 314 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SULT1C2O00338 296 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 ADAM10O14672 748 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 HSD17B6O14756 317 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 TIMM8AO60220 97 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-216ENST00000486741 TGM6O95932 706 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 FGF5P12034 268 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 HIST1H1DP16402 221 aaKnown RBP11.67□□□□□ -0.54
HMGN1-216ENST00000486741 S100A2P29034 98 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 FABP6P51161 128 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CAMK2BQ13554 666 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SLC51BQ86UW2 128 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 EMG1Q92979 244 aaKnown RBP11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SCMH1Q96GD3 660 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CA10Q9NS85 328 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 GLS2Q9UI32 602 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SLC22A20A6NK97 555 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CDC14BO60729 498 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 SNAPC5O75971 98 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 CLINT1Q14677 625 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 C1orf123Q9NWV4 160 aa11.67□□□□□ -0.54
HMGN1-216ENST00000486741 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF732B4DXR9 585 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 LGALS8O00214 317 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 GSTZ1O43708 216 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-216ENST00000486741 ZBTB37Q5TC79 503 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 HSD17B11Q8NBQ5 300 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 TMED6Q8WW62 240 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 A0A0B4J293 547 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 FOSL1P15407 271 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 IL2RGP31785 369 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 ATP1A1-AS1Q5TC04 95 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 LYG2Q86SG7 212 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 CYB5R1Q9UHQ9 305 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 LHFPL6Q9Y693 200 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
HMGN1-216ENST00000486741 GSTP1P09211 210 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms