RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ITPKCQ96DU7 683 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TIMD4Q96H15 378 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TMED9Q9BVK6 235 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 UFSP2Q9NUQ7 469 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TREM2Q9NZC2 230 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 FAM230AA0A1W2PPH8 454 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 ZNF732B4DXR9 585 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 LYNX1G3V0Z9 82 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 MAGEB3O15480 346 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 PPIHO43447 177 aaKnown RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 LYNX1P0DP58 116 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 PRKACBP22694 351 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 COL8A2P25067 703 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 GATA4P43694 442 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 PPP3R1P63098 170 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 NEDD8Q15843 81 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 ARMCX4Q5H9R4 360 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 OR13C5Q8NGS8 318 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 OR13C9Q8NGT0 318 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 TRMT10AQ8TBZ6 339 aaKnown RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 NPRL2Q8WTW4 380 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 RGP1Q92546 391 aaPredicted RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 ADAT3Q96EY9 351 aaPredicted RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 BORCS8Q96FH0 119 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 CPNE2Q96FN4 548 aaPredicted RBP9.64□□□□□ -0.87
NUP50-216ENST00000486184 PGLYRP3Q96LB9 341 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 Q96MF0 132 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 ZCCHC4Q9H5U6 513 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 ZNF696Q9H7X3 374 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 GCM1Q9NP62 436 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
NUP50-216ENST00000486184 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 LRP5LA4QPB2 252 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 HCKP08631 526 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 SLC25A16P16260 332 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 CPEP16870 476 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 ATF1P18846 271 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 RAB3AP20336 220 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 THBS2P35442 1172 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 GPR6P46095 362 aaPredicted RBP9.63□□□□□ -0.87
NUP50-216ENST00000486184 FUT6P51993 359 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 ATP1B3P54709 279 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 TMEM33P57088 247 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 TPBGQ13641 420 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 SPRNQ5BIV9 151 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 DMRTC1Q5HYR2 192 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 UBE2UQ5VVX9 321 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 KRT74Q7RTS7 529 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 ZNF573Q86YE8 665 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 PARP16Q8N5Y8 322 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 ZNF420Q8TAQ5 688 aaPredicted RBP9.63□□□□□ -0.87
NUP50-216ENST00000486184 C10orf105Q8TEF2 133 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 HPSE2Q8WWQ2 592 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 RAB1CQ92928 201 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 YIPF5Q969M3 257 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 OPALINQ96PE5 141 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 OR14A2Q96R54 314 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
NUP50-216ENST00000486184 PRRC2AP48634 2157 aaKnown RBP9.63□□□□□ -0.87
NUP50-216ENST00000486184 TRBV5-5A0A0J9YX44 114 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 ISPDA4D126 451 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 TRIM64A6NGJ6 449 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 ZNF879B4DU55 563 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 CCRL2O00421 344 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 SULT1B1O43704 296 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 RGS9O75916 674 aaPredicted RBP9.62□□□□□ -0.87
NUP50-216ENST00000486184 CYB5AP00167 134 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 PCMT1P22061 227 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 AZGP1P25311 298 aaKnown RBP9.62□□□□□ -0.87
NUP50-216ENST00000486184 GABRA5P31644 462 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 HAAOP46952 286 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 RBP2P50120 134 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 ZNF154Q13106 437 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 DOC2BQ14184 412 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 MPPED2Q15777 294 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 UBE2V2Q15819 145 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 LHFPL2Q6ZUX7 228 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 PHC2Q8IXK0 858 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 BOLLQ8N9W6 283 aaKnown RBP9.62□□□□□ -0.87
NUP50-216ENST00000486184 DNAAF1Q8NEP3 725 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 TMEM203Q969S6 136 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 SPSB1Q96BD6 273 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 TAS2R4Q9NYW5 299 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 RNF7Q9UBF6 113 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 CACNG2Q9Y698 323 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 NOTCH2Q04721 2471 aa9.62□□□□□ -0.87
NUP50-216ENST00000486184 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
NUP50-216ENST00000486184 PQLC2LA1A4F0 135 aa9.61□□□□□ -0.87
NUP50-216ENST00000486184 CYSRT1A8MQ03 144 aa9.61□□□□□ -0.87
NUP50-216ENST00000486184 CDIPTO14735 213 aa9.61□□□□□ -0.87
NUP50-216ENST00000486184 RP2O75695 350 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms