RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NRASP01111 189 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 IGLV3-1P01715 115 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 IGHV1-46P01743 117 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ERCC1P07992 297 aaPredicted RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 HCKP08631 526 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SMIM18P0DKX4 95 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 LYNX1P0DP58 116 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CPEP16870 476 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ZNF12P17014 697 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CD53P19397 219 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 TNFSF4P23510 183 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 LIPAP38571 399 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 DDOSTP39656 456 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 EVX1P49640 407 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 MMP15P51511 669 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ATP5J2P56134 94 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 GMFBP60983 142 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 BDH1Q02338 343 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 MLLT11Q13015 90 aaPredicted RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 OR8B8Q15620 311 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SSX1Q16384 188 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SWI5Q1ZZU3 235 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ACSM3Q53FZ2 586 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SPRNQ5BIV9 151 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ZMAT1Q5H9K5 638 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CLVS2Q5SYC1 327 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 UBE2UQ5VVX9 321 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 C11orf71Q6IPW1 123 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CEACAM19Q7Z692 300 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CDH24Q86UP0 819 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 DTX2Q86UW9 622 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 PHC2Q8IXK0 858 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ZDHHC23Q8IYP9 409 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 FTMTQ8N4E7 242 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 BOLLQ8N9W6 283 aaKnown RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 OR13C9Q8NGT0 318 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 OR13G1Q8NGZ3 307 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ZNF420Q8TAQ5 688 aaPredicted RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 RFT1Q96AA3 541 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 TRMT61AQ96FX7 289 aaKnown RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 KIRREL1Q96J84 757 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 PGLYRP3Q96LB9 341 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SORCS2Q96PQ0 1159 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 OR14A2Q96R54 314 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 NKX3-1Q99801 234 aaPredicted RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 MICU1Q9BPX6 476 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 SLC30A2Q9BRI3 323 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 MRPS26Q9BYN8 205 aaKnown RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 RAB1BQ9H0U4 201 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 MS4A5Q9H3V2 200 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ISYNA1Q9NPH2 558 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 CYSLTR2Q9NS75 346 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 UFSP2Q9NUQ7 469 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 NKIRAS2Q9NYR9 191 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 TAS2R4Q9NYW5 299 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 ZNF391Q9UJN7 358 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 EDARQ9UNE0 448 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 V9GYS6 101 aa4.78□□□□□ -1.64
COPS3-208ENST00000486032 RAI1Q7Z5J4 1906 aaPredicted RBP4.78□□□□□ -1.64
COPS3-208ENST00000486032 NOTCH2Q04721 2471 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 LOC100506127A0A0U1RQW1 187 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 LOC390937A0A1W2PQ73 354 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 hCG_1807616A0A1W2PRN6 198 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 SMIM30A4D0T7 59 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 TRIM64A6NGJ6 449 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ZNF879B4DU55 563 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 GABRPO00591 440 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 PLPP2O43688 288 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 GMDSO60547 372 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 GATBO75879 557 aaKnown RBP4.77□□□□□ -1.65
COPS3-208ENST00000486032 NCR1O76036 304 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 CST4P01036 141 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 HPXP02790 462 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 MAS1P04201 325 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ISG15P05161 165 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 CD2P06729 351 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 CD36P16671 472 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ATF1P18846 271 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 CCL1P22362 96 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 AZGP1P25311 298 aaKnown RBP4.77□□□□□ -1.65
COPS3-208ENST00000486032 THBS2P35442 1172 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 TGFBR2P37173 567 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 PTH2RP49190 550 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 POU3F4P49335 361 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 SRP9P49458 86 aaKnown RBP4.77□□□□□ -1.65
COPS3-208ENST00000486032 PPOXP50336 477 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 GPM6AP51674 278 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 LSM3P62310 102 aaKnown RBP4.77□□□□□ -1.65
COPS3-208ENST00000486032 PPP3R1P63098 170 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 FABP5Q01469 135 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ACSM1Q08AH1 577 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 TPBGQ13641 420 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 Q499Y3 187 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 YIF1BQ5BJH7 314 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 FAM27D1Q5T7N8 215 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 C22orf42Q6IC83 251 aa4.77□□□□□ -1.65
COPS3-208ENST00000486032 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms