RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 OR4C6Q8NH72 309 aa3□□□□□ -1.93
FXN-204ENST00000484259 TERB2Q8NHR7 220 aa3□□□□□ -1.93
FXN-204ENST00000484259 SHKBP1Q8TBC3 707 aa3□□□□□ -1.93
FXN-204ENST00000484259 SPPL2BQ8TCT7 592 aa3□□□□□ -1.93
FXN-204ENST00000484259 CANT1Q8WVQ1 401 aa3□□□□□ -1.93
FXN-204ENST00000484259 ASB13Q8WXK3 278 aa3□□□□□ -1.93
FXN-204ENST00000484259 NDRG1Q92597 394 aaKnown RBP3□□□□□ -1.93
FXN-204ENST00000484259 TM4SF18Q96CE8 201 aa3□□□□□ -1.93
FXN-204ENST00000484259 P2RY11Q96G91 374 aa3□□□□□ -1.93
FXN-204ENST00000484259 DNAJC30Q96LL9 226 aa3□□□□□ -1.93
FXN-204ENST00000484259 ZNF354BQ96LW1 612 aa3□□□□□ -1.93
FXN-204ENST00000484259 CNBD2Q96M20 576 aa3□□□□□ -1.93
FXN-204ENST00000484259 BIRC8Q96P09 236 aa3□□□□□ -1.93
FXN-204ENST00000484259 OR7D2Q96RA2 312 aa3□□□□□ -1.93
FXN-204ENST00000484259 GPR21Q99679 349 aa3□□□□□ -1.93
FXN-204ENST00000484259 APOOQ9BUR5 198 aa3□□□□□ -1.93
FXN-204ENST00000484259 MLST8Q9BVC4 326 aa3□□□□□ -1.93
FXN-204ENST00000484259 CHST5Q9GZS9 411 aa3□□□□□ -1.93
FXN-204ENST00000484259 DCSTAMPQ9H295 470 aa3□□□□□ -1.93
FXN-204ENST00000484259 ARRDC1-AS1Q9H2J1 176 aa3□□□□□ -1.93
FXN-204ENST00000484259 OR51I1Q9H343 314 aa3□□□□□ -1.93
FXN-204ENST00000484259 C7orf69Q9H7B7 122 aa3□□□□□ -1.93
FXN-204ENST00000484259 ZNF442Q9H7R0 627 aa3□□□□□ -1.93
FXN-204ENST00000484259 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
FXN-204ENST00000484259 PYCARDQ9ULZ3 195 aa3□□□□□ -1.93
FXN-204ENST00000484259 PSG8Q9UQ74 426 aa3□□□□□ -1.93
FXN-204ENST00000484259 UTP11Q9Y3A2 253 aaKnown RBP3□□□□□ -1.93
FXN-204ENST00000484259 BCL9LQ86UU0 1499 aa3□□□□□ -1.93
FXN-204ENST00000484259 ATRNO75882 1429 aa3□□□□□ -1.93
FXN-204ENST00000484259 SSH2Q76I76 1423 aa3□□□□□ -1.93
FXN-204ENST00000484259 AKAP12Q02952 1782 aa3□□□□□ -1.93
FXN-204ENST00000484259 MED23Q9ULK4 1368 aa3□□□□□ -1.93
FXN-204ENST00000484259 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 PTPRJQ12913 1337 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 IGSF9BQ9UPX0 1349 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 VIRMAQ69YN4 1812 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 TRBV5-7A0A0A0MS05 114 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 A0A1B0GW55 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 TRAPPC13A5PLN9 417 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 MAP1LC3B2A6NCE7 125 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 OR5B21A6NL26 309 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 USP27XA6NNY8 438 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 SRRM4A7MD48 611 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 LYRM9A8MSI8 78 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 IDSB3KWA1 339 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 GAPDHSO14556 408 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 COPEO14579 308 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 HSD17B6O14756 317 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 MRPS12O15235 138 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 HMGB3O15347 200 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 CXCL13O43927 109 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 ZIC3O60481 467 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 EEDO75530 441 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 STK16O75716 305 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 STC2O76061 302 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 RENP00797 406 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 APOA2P02652 100 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 SEMG1P04279 462 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 C8BP07358 591 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 OR5AL1P0C617 328 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 OR56A5P0C7T3 313 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L2P0CJ85 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L3P0CJ86 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L5P0CJ88 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L6P0CJ89 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L7P0CJ90 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 PSG1P11464 419 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 GP1BBP13224 206 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 COX5AP20674 150 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 USF1P22415 310 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 SLC2A5P22732 501 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 GATA3P23771 443 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 CTGFP29279 349 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 IL12AP29459 219 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 S100A7P31151 101 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 CDKN2BP42772 138 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 AVPR1BP47901 424 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 LGALS7P47929 136 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 RORCP51449 518 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DLX1P56177 255 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 ZNF121P58317 390 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 ERVFRD-1P60508 538 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 CX3CL1P78423 397 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 POU3F1Q03052 451 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 BAXQ07812 192 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 PPP1R1AQ13522 171 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 OR5I1Q13606 314 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 CDK10Q15131 360 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUOXA1Q1HG43 343 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 LRRC26Q2I0M4 334 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 RAB6CQ53S08 254 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DCST2Q5T1A1 773 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 FAM27D1Q5T7N8 215 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 HENMT1Q5T8I9 393 aaKnown RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 SP5Q6BEB4 398 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 AWAT2Q6E213 333 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 DUX4L9Q6RFH8 374 aaPredicted RBP2.99□□□□□ -1.93
FXN-204ENST00000484259 RASSF6Q6ZTQ3 369 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 Q6ZWC4 215 aa2.99□□□□□ -1.93
FXN-204ENST00000484259 CHMP1BQ7LBR1 199 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms