RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 CCL13Q99616 98 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 ACOXLQ9NUZ1 547 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 CLN6Q9NWW5 311 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 RASL12Q9NYN1 266 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 ENPP5Q9UJA9 477 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 IKZF2Q9UKS7 526 aa12.46□□□□□ -0.41
PRKN-207ENST00000479615 CAB39Q9Y376 341 aaPredicted RBP12.46□□□□□ -0.41
PRKN-207ENST00000479615 IGHV3OR15-7A0A075B7D8 119 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 IGHV3OR16-10A0A075B7F0 116 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 CENPVL3A0A0U1RRI6 287 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 DHRS7CA6NNS2 312 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 ZNF670-ZNF695F2Z2N8 137 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.45□□□□□ -0.42
PRKN-207ENST00000479615 CIB2O75838 187 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 DHRS3O75911 302 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 IGLV3-1P01715 115 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 HCCSP53701 268 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 TMED1Q13445 227 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 C12orf73Q69YU5 71 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 ZNF322Q6U7Q0 402 aaPredicted RBP12.45□□□□□ -0.42
PRKN-207ENST00000479615 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 TBC1D15Q8TC07 691 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 SSMEM1Q8WWF3 244 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 CENPNQ96H22 339 aaPredicted RBP12.45□□□□□ -0.42
PRKN-207ENST00000479615 TBX15Q96SF7 602 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 SIRPDQ9H106 197 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 RASSF4Q9H2L5 321 aa12.45□□□□□ -0.42
PRKN-207ENST00000479615 WARS2Q9UGM6 360 aaKnown RBP12.45□□□□□ -0.42
PRKN-207ENST00000479615 IGHV1-69DA0A0B4J2H0 117 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 ZNF732B4DXR9 585 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 LOC110117498-PIK3R3F6TDL0 507 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 IGHV1-69P01742 117 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 CRYBA1P05813 215 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 SFTPBP07988 381 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 MRPL3P09001 348 aaKnown RBP12.44□□□□□ -0.42
PRKN-207ENST00000479615 GLRA1P23415 457 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 GPM6AP51674 278 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 CAV3P56539 151 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 ARF6P62330 175 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 HOXA4Q00056 320 aaPredicted RBP12.44□□□□□ -0.42
PRKN-207ENST00000479615 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 SLC35F2Q8IXU6 374 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 CCDC54Q8NEL0 328 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 OR51E1Q8TCB6 317 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 HPSE2Q8WWQ2 592 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 RPL3LQ92901 407 aaKnown RBP12.44□□□□□ -0.42
PRKN-207ENST00000479615 RFKQ969G6 155 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 OR51I2Q9H344 312 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 GPR84Q9NQS5 396 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 NLKQ9UBE8 527 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRKN-207ENST00000479615 MMP24Q9Y5R2 645 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 SNX5Q9Y5X3 404 aa12.44□□□□□ -0.42
PRKN-207ENST00000479615 NBEAL1Q6ZS30 2694 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 DLGAP1O14490 977 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 SIGLEC5O15389 551 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 HOXA3O43365 443 aaPredicted RBP12.43□□□□□ -0.42
PRKN-207ENST00000479615 NRASP01111 189 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ACAA1P09110 424 aaPredicted RBP12.43□□□□□ -0.42
PRKN-207ENST00000479615 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 CXCR4P61073 352 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ZNF684Q5T5D7 378 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ZNF573Q86YE8 665 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ELMOD2Q8IZ81 293 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 OR8J1Q8NGP2 316 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ANGPTL6Q8NI99 470 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 TRUB1Q8WWH5 349 aaKnown RBP12.43□□□□□ -0.42
PRKN-207ENST00000479615 LHX4Q969G2 390 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 TMIGD2Q96BF3 282 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 DUX5Q96PT3 197 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
PRKN-207ENST00000479615 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 PPP1R3EQ9H7J1 279 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 ADGRL4Q9HBW9 690 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 SLC25A10Q9UBX3 287 aaPredicted RBP12.43□□□□□ -0.42
PRKN-207ENST00000479615 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 PIGLQ9Y2B2 252 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 R4GMQ9 66 aa12.43□□□□□ -0.42
PRKN-207ENST00000479615 OR2AT4A6NND4 320 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 PSMD9O00233 223 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 AKR7A2O43488 359 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 MITFO75030 526 aaPredicted RBP12.42□□□□□ -0.42
PRKN-207ENST00000479615 SULT1C4O75897 302 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 TTRP02766 147 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 KRT8P05787 483 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 EEF1B2P24534 225 aaKnown RBP12.42□□□□□ -0.42
PRKN-207ENST00000479615 HTR1FP30939 366 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 IKZF1Q13422 519 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 BLMHQ13867 455 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 CLVS2Q5SYC1 327 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 PLCXD3Q63HM9 321 aa12.42□□□□□ -0.42
PRKN-207ENST00000479615 Q6ZSR3 168 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms