RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SLC6A5Q9Y345 797 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 MED31Q9Y3C7 131 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 ORC6Q9Y5N6 252 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 ETV7Q9Y603 341 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 U3KQV3 271 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 CACNA1AO00555 2505 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 IGF2RP11717 2491 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 TPRP12270 2363 aaKnown RBP3.05□□□□□ -1.92
UBR3-209ENST00000477461 SVILO95425 2214 aa3.05□□□□□ -1.92
UBR3-209ENST00000477461 MUC3AQ02505 3323 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ZNF407Q9C0G0 2248 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 GTF3C1Q12789 2109 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 KIAA1549Q9HCM3 1950 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TRAV36DV7A0A075B6V5 113 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 A0A087WUJ7 227 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 IGHV3-16A0A0C4DH30 117 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TMEM72A0PK05 275 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 EFCAB9A8MZ26 197 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NPIPA5E9PKD4 350 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 G3V2T6 193 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SULT2B1O00204 365 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 FFAR1O14842 300 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ZNF208O43345 1280 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TXNL1O43396 289 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR2T1O43869 369 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MGRN1O60291 552 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 HCN1O60741 890 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 GLSO94925 669 aaPredicted RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR6A2O95222 327 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SYNGR4O95473 234 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ATP6V1G2O95670 118 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ACTL6AO96019 429 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MT-ATP6P00846 226 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 IFI30P13284 250 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ANXA8P13928 327 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ABOP16442 354 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 PTNP21246 168 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 GSTM3P21266 225 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MAGEB1P43366 347 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 RPS5P46782 204 aaKnown RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR2B6P58173 313 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NDPQ00604 133 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SRYQ05066 204 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 PPP1R8Q12972 351 aaKnown RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 RIPK1Q13546 671 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 DGCR6Q14129 220 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SNCBQ16143 134 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SGCBQ16585 318 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MICAQ29983 383 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TMEM176BQ3YBM2 270 aaPredicted RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 C1orf140Q5VVS0 124 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 REG3GQ6UW15 175 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MBOAT2Q6ZWT7 520 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NANOGNBQ7Z5D8 188 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NKAIN4Q8IVV8 208 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NRMQ8IXM6 262 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 UBQLNLQ8IYU4 475 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR4K5Q8NGD3 323 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR5M1Q8NGP8 315 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR1B1Q8NGR6 318 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NEIL3Q8TAT5 605 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 GNPDA2Q8TDQ7 276 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TMEM239Q8WW34 195 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 GGHQ92820 318 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 HIST1H2ACQ93077 130 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 RFT1Q96AA3 541 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SLC25A36Q96CQ1 311 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NTNG2Q96CW9 530 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 SGTBQ96EQ0 304 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NRBF2Q96F24 287 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR5B2Q96R09 309 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TMEM43Q9BTV4 400 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OSBPL10Q9BXB5 764 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 RSPO3Q9BXY4 272 aaPredicted RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 SLC19A3Q9BZV2 496 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 OR11A1Q9GZK7 315 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TMEM185BQ9H7F4 350 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ZNF665Q9H7R5 613 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 RNPEPL1Q9HAU8 725 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 TIGARQ9NQ88 270 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 C8orf4Q9NR00 106 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 PDP1Q9P0J1 537 aaPredicted RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 STX18Q9P2W9 335 aaKnown RBP3.04□□□□□ -1.92
UBR3-209ENST00000477461 ENOPH1Q9UHY7 261 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 NPIPA1Q9UND3 350 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MGAT4BQ9UQ53 548 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 HDGFL3Q9Y3E1 203 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ZNF337Q9Y3M9 751 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 AUP1Q9Y679 476 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 AP4B1Q9Y6B7 739 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 CACNA1BQ00975 2339 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 MED12Q93074 2177 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 ZGRF1Q86YA3 2104 aa3.04□□□□□ -1.92
UBR3-209ENST00000477461 CACNA1GO43497 2377 aa3.03□□□□□ -1.92
UBR3-209ENST00000477461 WDFY4Q6ZS81 3184 aa3.03□□□□□ -1.92
UBR3-209ENST00000477461 A0A087WUU8 490 aa3.03□□□□□ -1.92
UBR3-209ENST00000477461 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
UBR3-209ENST00000477461 A0A1B0GTH9 108 aa3.03□□□□□ -1.92
UBR3-209ENST00000477461 TMEM129A0AVI4 362 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms