RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 JAM3Q9BX67 310 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 BEX2Q9BXY8 128 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 SHARPINQ9H0F6 387 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 PPP1R3EQ9H7J1 279 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 GPR173Q9NS66 373 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 CNOT2Q9NZN8 540 aaKnown RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 FRRS1LQ9P0K9 344 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 LPAR3Q9UBY5 353 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 HHLA2Q9UM44 414 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 DIMT1Q9UNQ2 313 aaKnown RBP11.55□□□□□ -0.56
USF1-205ENST00000473969 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
USF1-205ENST00000473969 TRAV20A0A0B4J274 112 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 CEACAM18A8MTB9 384 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 NDUFA2O43678 99 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 PIPP12273 146 aaPredicted RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 CD80P33681 288 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 THBS2P35442 1172 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 RBMXP38159 391 aaKnown RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 KIR3DL2P43630 455 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 ST3GAL4Q11206 333 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 MICBQ29980 383 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 CHRFAM7AQ494W8 412 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 ZNF404Q494X3 552 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 SFRP4Q6FHJ7 346 aaPredicted RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 IZUMO2Q6UXV1 221 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 KRT74Q7RTS7 529 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 RDH10Q8IZV5 341 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 OR5AK2Q8NH90 309 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 GGHQ92820 318 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 RPL3LQ92901 407 aaKnown RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 NEIL1Q96FI4 390 aaPredicted RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 TMEM246Q9BRR3 403 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 ISG20L2Q9H9L3 353 aaKnown RBP11.54□□□□□ -0.56
USF1-205ENST00000473969 NEK6Q9HC98 313 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 DNAJB11Q9UBS4 358 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 CDC42EP3Q9UKI2 254 aa11.54□□□□□ -0.56
USF1-205ENST00000473969 TRBV2A0A0J9YWF9 115 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 ANKRD61A6NGH8 418 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 OOEPA6NGQ2 149 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 A6NIN4 97 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 TMEM212A6NML5 194 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 PLPP2O43688 288 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 ISG15P05161 165 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 LIMS3P0CW19 117 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 LIMS4P0CW20 117 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 VHLP40337 213 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 TGM4P49221 684 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 ETV1P50549 477 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 LCN2P80188 198 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
USF1-205ENST00000473969 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 WDR82Q6UXN9 313 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 DCDC5Q6ZRR9 648 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 Q6ZSR3 168 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 AHSA2Q719I0 299 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 WDR86Q86TI4 376 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 ZNF573Q86YE8 665 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 SCCPDHQ8NBX0 429 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 C19orf18Q8NEA5 215 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 OR13C3Q8NGS6 347 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 OR10Z1Q8NGY1 313 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 PP6455Q8WZ26 134 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 TLNRD1Q9H1K6 362 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 METTL17Q9H7H0 456 aaPredicted RBP11.53□□□□□ -0.56
USF1-205ENST00000473969 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 LRCH1Q9Y2L9 728 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 ABCA1O95477 2261 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 MTORP42345 2549 aa11.53□□□□□ -0.56
USF1-205ENST00000473969 TANC2Q9HCD6 1990 aa11.52□□□□□ -0.56
USF1-205ENST00000473969 A0A0G2JMP0 313 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 A0A0X1KG70 313 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 MYL12BO14950 172 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 CRLF1O75462 422 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 WNT2P09544 360 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 GATA3P23771 443 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 CFHR2P36980 270 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 NANOS3P60323 173 aaKnown RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 GMFBP60983 142 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 GNB2P62879 340 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 CR1LQ2VPA4 569 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 CCDC58Q4VC31 144 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 DMRTC1Q5HYR2 192 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 C6orf141Q5SZD1 244 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 DCAF12L2Q5VW00 463 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 TMEM42Q69YG0 159 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 FAHD2BQ6P2I3 314 aaPredicted RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 RPL22L1Q6P5R6 122 aaKnown RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 C11orf53Q8IXP5 236 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 GCSAMQ8N6F7 178 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 TEX29Q8N6K0 151 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms