RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 DDI2Q5TDH0 399 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 GLT8D1Q68CQ7 371 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 ANKRD13BQ86YJ7 626 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 LINC00528Q8N1L1 170 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 OR1M1Q8NGA1 313 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 LILRB1Q8NHL6 650 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 UBASH3BQ8TF42 649 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 DVL3Q92997 716 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 TMIGD2Q96BF3 282 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 RNF170Q96K19 258 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 S100A13Q99584 98 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 SLC30A2Q9BRI3 323 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 CACNG6Q9BXT2 260 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 CXXC4Q9H2H0 198 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 SAP30LQ9HAJ7 183 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM138Q9NPI0 162 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 SNTG1Q9NSN8 517 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 TXNL4BQ9NX01 149 aaKnown RBP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 NDUFA13Q9P0J0 144 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 SF3B6Q9Y3B4 125 aaKnown RBP6.93□□□□□ -1.3
HDAC6-216ENST00000468949 CREBBPQ92793 2442 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 APCP25054 2843 aa6.93□□□□□ -1.3
HDAC6-216ENST00000468949 LRBAP50851 2863 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TRBV5-7A0A0A0MS05 114 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 SMIM31A0A1B0GVY4 71 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 hCG_1807616A0A1W2PRN6 198 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 ZSCAN5BA6NJL1 495 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM210A6NLX4 147 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 C17orf100A8MU93 164 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF732B4DXR9 585 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 F5H5P2 479 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 SLC22A1O15245 554 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 GPX5O75715 221 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 PLATP00750 562 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 GRPP07492 148 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 SOD3P08294 240 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 IRF2P14316 349 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 SRMP19623 302 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 RAB3BP20337 219 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 FGF9P31371 208 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 CRYBB2P43320 205 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 MAGEB1P43366 347 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 SERPINB10P48595 397 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 MTNR1BP49286 362 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 POU3F4P49335 361 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 RBP2P50120 134 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 PSMD7P51665 324 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 FUT6P51993 359 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TMBIM6P55061 237 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 MTCP1P56278 107 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 KRTAP10-9P60411 292 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 FAM27D1Q5T7N8 215 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 CD200R1LQ6Q8B3 271 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM91Q6ZNR0 172 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 Q6ZSR3 168 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 DTX2Q86UW9 622 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF573Q86YE8 665 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 OR5A2Q8NGI9 324 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 OR11L1Q8NGX0 322 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF420Q8TAQ5 688 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 RPL3LQ92901 407 aaKnown RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TRMT61AQ96FX7 289 aaKnown RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 OR2V2Q96R30 315 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 BCL7BQ9BQE9 202 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TRAF4Q9BUZ4 470 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 FN3KRPQ9HA64 309 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 BATF3Q9NR55 127 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 RSL24D1Q9UHA3 163 aaKnown RBP6.92□□□□□ -1.3
HDAC6-216ENST00000468949 POLDIP2Q9Y2S7 368 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
HDAC6-216ENST00000468949 TRAV8-7A0A075B6U6 113 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 TRAV1-2A0A0B4J238 106 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 FAM221AA4D161 298 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 LRP5LA4QPB2 252 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 LRRC30A6NM36 301 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 MLNRO43193 412 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 SC5DO75845 299 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 CDRT1O95170 752 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 IGHV1-46P01743 117 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 SOX6P35712 828 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF93P35789 620 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-216ENST00000468949 HAAOP46952 286 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 MMP15P51511 669 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 VBP1P61758 197 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 NCS1P62166 190 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 CCL8P80075 99 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 MXD1Q05195 221 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 TNK1Q13470 666 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 UBE2V2Q15819 145 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 DMRTC1Q5HYR2 192 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM42Q69YG0 159 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 AWAT2Q6E213 333 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 UNQ9370/PRO34162Q6UXP9 181 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms