RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 THEGLP0DJG4 465 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF121P58317 390 aaPredicted RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 TSPO2Q5TGU0 170 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 GGNBP1Q5YKI7 109 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 ELL3Q9HB65 397 aaPredicted RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 CPAMD8Q8IZJ3 1885 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 DHRS7CA6NNS2 312 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 ZNF878C9JN71 531 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 TAAR5O14804 337 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 POU2F2P09086 479 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 PET100P0DJ07 73 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 SERPINA2P20848 420 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 S100PP25815 95 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 VEGFBP49765 207 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 YPEL5P62699 121 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 C1orf189Q5VU69 101 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 DEGS2Q6QHC5 323 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 LANCL3Q6ZV70 420 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 H1FNTQ75WM6 255 aaPredicted RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 APCDD1LQ8NCL9 501 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 RARRES2Q99969 163 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 PUS1Q9Y606 427 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 TCRBV21S2A2A0A5A6 115 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 ZNF727A8MUV8 499 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 PPIHO43447 177 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 DEDDO75618 318 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 JTBO76095 146 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 IFNA2P01563 188 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 HPNP05981 417 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 EIF2S3P41091 472 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 HAAOP46952 286 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 EIF5AP63241 154 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 CHRFAM7AQ494W8 412 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 FAM57BQ71RH2 274 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 C6orf201Q7Z4U5 140 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 ZNF2Q9BSG1 426 aaPredicted RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 PAPOLGQ9BWT3 736 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 OR10A2Q9H208 303 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 LIME1Q9H400 295 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 SUSD2Q9UGT4 822 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 URB1O60287 2271 aaKnown RBP11.08□□□□□ -0.64
CLCNKA-204ENST00000464764 C5orf67F2Z3F1 127 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 ATXN7O15265 892 aaPredicted RBP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 PRH1P02810 166 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 PAX6P26367 422 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 RRADP55042 308 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 TMEM156Q8N614 296 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 DEFB119Q8N690 84 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 FNDC9Q8TBE3 224 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 AP4M1O00189 453 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 ADAM10O14672 748 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 SEMA4FO95754 770 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 GIMD1P0DJR0 217 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 CAMLGP49069 296 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 FBXW4P57775 412 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 LRRC61Q9BV99 259 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 CUTCQ9NTM9 273 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 A6NIZ1 184 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 SCGNO76038 276 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 MBPP02686 304 aaPredicted RBP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 KLK2P20151 261 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 NOVA1P51513 510 aaKnown RBP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 RAP1BP61224 184 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 RAP1AP62834 184 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 NHLH2Q02577 135 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 OR2B11Q5JQS5 317 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 OR56B1Q8NGI3 324 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 TCTEX1D2Q8WW35 142 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 FBLN5Q9UBX5 448 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 MEMO1Q9Y316 297 aa11.07□□□□□ -0.64
CLCNKA-204ENST00000464764 SHANK1Q9Y566 2161 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 UNC13CQ8NB66 2214 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 STMND1H3BQB6 276 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 EFNA2O43921 213 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 CTHP32929 405 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 CSNK1EP49674 416 aaKnown RBP11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 PRSS12P56730 875 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 RPUSD3Q6P087 351 aaKnown RBP11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 BRICD5Q6PL45 260 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 CRIP3Q6Q6R5 217 aa11.06□□□□□ -0.64
CLCNKA-204ENST00000464764 PLXDC2Q6UX71 529 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms