RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SLC2A2P11168 524 aaPredicted RBP12.47□□□□□ -0.41
TNF-208ENST00000449264 NAT2P11245 290 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 RORCP51449 518 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 MTCP1P56278 107 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 CEACAM21Q3KPI0 293 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 IDNKQ5T6J7 187 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 SP5Q6BEB4 398 aaPredicted RBP12.47□□□□□ -0.41
TNF-208ENST00000449264 FBXL14Q8N1E6 418 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 MUC15Q8N387 334 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 OR5P3Q8WZ94 311 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 RNF170Q96K19 258 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 MICU1Q9BPX6 476 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 UBTD1Q9HAC8 227 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 NEK6Q9HC98 313 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
TNF-208ENST00000449264 CENPEQ02224 2701 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.41
TNF-208ENST00000449264 IGKV1-27A0A075B6S5 117 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
TNF-208ENST00000449264 ZNF732B4DXR9 585 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 F5H5P2 479 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 M0R233 179 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 HS3ST1O14792 307 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 ALX3O95076 343 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 PRF1P14222 555 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 COL8A1P27658 744 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 THBS2P35442 1172 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 POU3F4P49335 361 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 RBP2P50120 134 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 ZNF81P51508 661 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 PSMD7P51665 324 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 FUT6P51993 359 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 CLDN12P56749 244 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 KISS1Q15726 138 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 MOGQ16653 247 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 LHFPL2Q6ZUX7 228 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 KRT74Q7RTS7 529 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 RTL8AQ9BWD3 113 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 SLC22A4Q9H015 551 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.41
TNF-208ENST00000449264 ABCB9Q9NP78 766 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 DYNLRB1Q9NP97 96 aa12.46□□□□□ -0.41
TNF-208ENST00000449264 A0A0B4J203 849 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 OR5B21A6NL26 309 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 B9A039 149 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 AIPO00170 330 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 ALDOBP05062 364 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 OR3A4PP47883 348 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 ATP1B3P54709 279 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 EFNB3Q15768 340 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 RAB11BQ15907 218 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 DGUOKQ16854 277 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 PNLDC1Q8NA58 520 aaKnown RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 CPNE2Q96FN4 548 aaPredicted RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 CNTD2Q9H8S5 307 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 CYSLTR2Q9NS75 346 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 NKIRAS2Q9NYR9 191 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 PTPN13Q12923 2485 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 PQLC2LA1A4F0 135 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 GOSR1O95249 250 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 HAAOP46952 286 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 EVX1P49640 407 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 GNG3P63215 75 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 P2RY14Q15391 338 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 AWAT2Q6E213 333 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 OR5A2Q8NGI9 324 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 OR4D6Q8NGJ1 314 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 ZNF671Q8TAW3 534 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 SORCS2Q96PQ0 1159 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 SLIRPQ9GZT3 109 aaKnown RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
TNF-208ENST00000449264 PLEKHB1Q9UF11 243 aaPredicted RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
TNF-208ENST00000449264 SLC17A2O00624 439 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 SPRY1O43609 319 aaPredicted RBP12.44□□□□□ -0.42
TNF-208ENST00000449264 HTR2CP28335 458 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 CRIP3Q6Q6R5 217 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 WDR86Q86TI4 376 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 TMEM200AQ86VY9 491 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 CALHM1Q8IU99 346 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
TNF-208ENST00000449264 OR6M1Q8NGM8 313 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 TNFAIP8L1Q8WVP5 186 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 AP3S1Q92572 193 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 UQCC2Q9BRT2 126 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 C6orf62Q9GZU0 229 aaPredicted RBP12.44□□□□□ -0.42
TNF-208ENST00000449264 CXXC4Q9H2H0 198 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 CLEC4MQ9H2X3 399 aaPredicted RBP12.44□□□□□ -0.42
TNF-208ENST00000449264 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 LIN7BQ9HAP6 207 aa12.44□□□□□ -0.42
TNF-208ENST00000449264 PTTG2Q9NZH5 202 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms