RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CRMP1Q14194 572 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 GGNBP1Q5YKI7 109 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 LFNGQ8NES3 379 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 CNN2Q99439 309 aaKnown RBP11.58□□□□□ -0.56
DDX56-206ENST00000446987 SLC25A18Q9H1K4 315 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 KCNJ16Q9NPI9 418 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 A0A0A6YYD5 115 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CYR61O00622 381 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CCSO14618 274 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TP53I11O14683 189 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TMPRSS11DO60235 418 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TSPAN15O95858 294 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CSTBP04080 98 aaKnown RBP11.57□□□□□ -0.56
DDX56-206ENST00000446987 AMY2AP04746 511 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 GZMBP10144 247 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CHATP28329 748 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 OTX2P32243 289 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TBR1Q16650 682 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 ZNF674Q2M3X9 581 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 RIPPLY2Q5TAB7 128 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 KIRREL2Q6UWL6 708 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 Q6ZRG5 221 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TSLPQ969D9 159 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 SERINC2Q96SA4 455 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 HIST1H2BLQ99880 126 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 SLC25A31Q9H0C2 315 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 OR14J1Q9UGF5 321 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 DAPP1Q9UN19 280 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
DDX56-206ENST00000446987 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 ATRXP46100 2492 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 PHOX2AO14813 284 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 ALOX12BO75342 701 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 JTBO76095 146 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 RPLP1P05386 114 aaKnown RBP11.57□□□□□ -0.56
DDX56-206ENST00000446987 OR8U9P0C7N5 309 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TMIGD3P0DMS9 266 aaPredicted RBP11.57□□□□□ -0.56
DDX56-206ENST00000446987 FABP4P15090 132 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 CXCR1P25024 350 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 LMO1P25800 156 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 RPP30P78346 268 aaKnown RBP11.57□□□□□ -0.56
DDX56-206ENST00000446987 IL13RA1P78552 427 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 FUT5Q11128 374 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 PPP1R1AQ13522 171 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 RAB35Q15286 201 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 DEFB109BQ30KR1 87 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 OR4C11Q6IEV9 310 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 SLC35F2Q8IXU6 374 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 OR8U1Q8NH10 309 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 EXTL1Q92935 676 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 C8orf44Q96CB5 159 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 MCHR1Q99705 422 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 PDCD1LG2Q9BQ51 273 aa11.57□□□□□ -0.56
DDX56-206ENST00000446987 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 LOC102723996A0A087X1L8 192 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 RAB27BO00194 218 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 DFFBO76075 338 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 ADRA2CP18825 462 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 SSR2P43308 183 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 SLC16A1P53985 500 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 RAB38P57729 211 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 TRA2BP62995 288 aaKnown RBP11.56□□□□□ -0.56
DDX56-206ENST00000446987 BTG2P78543 158 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 HSPB3Q12988 150 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 GXYLT1Q4G148 440 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 ARHGAP11AQ6P4F7 1023 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 OPN5Q6U736 354 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 ZNF573Q86YE8 665 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 MMP21Q8N119 569 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 TMEM255BQ8WV15 326 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 SEH1LQ96EE3 360 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 MRGPRX4Q96LA9 322 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 FAM212BQ9NTI7 297 aaPredicted RBP11.56□□□□□ -0.56
DDX56-206ENST00000446987 P4HTMQ9NXG6 502 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 VSIG4Q9Y279 399 aa11.56□□□□□ -0.56
DDX56-206ENST00000446987 MRPS33Q9Y291 106 aaKnown RBP11.56□□□□□ -0.56
DDX56-206ENST00000446987 TNRC6AQ8NDV7 1962 aaKnown RBP11.56□□□□□ -0.56
DDX56-206ENST00000446987 TRBV5-7A0A0A0MS05 114 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 ZNF736B4DX44 427 aaPredicted RBP11.55□□□□□ -0.56
DDX56-206ENST00000446987 B3GALT2O43825 422 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 CDC14BO60729 498 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 GPANK1O95872 356 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 THY1P04216 161 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 COX6A1P12074 109 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 SERPINF1P36955 418 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
DDX56-206ENST00000446987 EMP2P54851 167 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 ERVFC1-1P60608 527 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 Q0VFX4 171 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 PCOLCEQ15113 449 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 ELOBQ15370 118 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 OR9K2Q8NGE7 335 aa11.55□□□□□ -0.56
DDX56-206ENST00000446987 RGP1Q92546 391 aaPredicted RBP11.55□□□□□ -0.56
DDX56-206ENST00000446987 LYRM4Q9HD34 91 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms