RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TNFAIP8O95379 198 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 CTDNEP1O95476 244 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 KLF8O95600 359 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 TSPAN13O95857 204 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 CD160O95971 181 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 HBE1P02100 147 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 PCCAP05165 728 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 KLK1P06870 262 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 FBP1P09467 338 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 UCHL3P15374 230 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 NQO1P15559 274 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 HLA-GP17693 338 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 F8A1P23610 371 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 HTR1FP30939 366 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 TALDO1P37837 337 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 EIF1P41567 113 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 SRP9P49458 86 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 AP2S1P53680 142 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 DLX1P56177 255 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 UBE2KP61086 200 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ESRRGP62508 458 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ELF3P78545 371 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 TGFBR3Q03167 851 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 AESQ08117 197 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 DAZ2Q13117 558 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 OR4D1Q15615 310 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 NRF1Q16656 503 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 GCSAMLQ5JQS6 135 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 SPIN3Q5JUX0 258 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 SYPL2Q5VXT5 272 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 TRIQKQ629K1 86 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 RPL13AP3Q6NVV1 102 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ABHD13Q7L211 337 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 PHF13Q86YI8 300 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 FAM71E2Q8N5Q1 922 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 C2orf73Q8N5S3 287 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 NOXO1Q8NFA2 376 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 OR56A4Q8NGH8 313 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 PIGXQ8TBF5 258 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ZNF502Q8TBZ5 544 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 EXOSC8Q96B26 276 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 CENPNQ96H22 339 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 OXGR1Q96P68 337 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 MS4A4EQ96PG1 132 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 TBX15Q96SF7 602 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 C2orf88Q9BSF0 95 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 PORCNQ9H237 461 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 SPNS1Q9H2V7 528 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ZNF430Q9H8G1 570 aaPredicted RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 RHOFQ9HBH0 211 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 DAZ3Q9NR90 486 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 BABAM2Q9NXR7 383 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 KCNIP1Q9NZI2 227 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 RWDD2AQ9UIY3 292 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 GUCA1BQ9UMX6 200 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 NUBP2Q9Y5Y2 271 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 USH1CQ9Y6N9 552 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 PCF11O94913 1555 aaKnown RBP2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
LSM1P1-201ENST00000438629 ASTN1O14525 1302 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 ZNF532Q9HCE3 1301 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 NKX2-6A6NCS4 301 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 DFFAO00273 331 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 PFDN6O15212 129 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 MRPS12O15235 138 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 SGCEO43556 437 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 CHP2O43745 196 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 NPIPB7O75200 414 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 MPDU1O75352 247 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 CLDN11O75508 207 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 AQP8O94778 261 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 UTS2O95399 124 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 IGHV2-5P01817 119 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 SMIM6P0DI80 62 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RBMY1CP0DJD4 496 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 ZNF17P17021 662 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 S100PP25815 95 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 GPX4P36969 197 aaPredicted RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 CTRLP40313 264 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RFC3P40938 356 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RBM34P42696 430 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 MAGEA12P43365 314 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 KLK7P49862 253 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RAB13P51153 203 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RAP1BP61224 184 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 SLC35B1P78383 322 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 HPCAP84074 193 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 TFAMQ00059 246 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 TWF1Q12792 350 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 SRSF6Q13247 344 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 TFDP2Q14188 446 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 ZNF630Q2M218 657 aaPredicted RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RPEL1Q2QD12 228 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 TRMT5Q32P41 509 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 ACSM3Q53FZ2 586 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 PAGE3Q5JUK9 113 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 C1orf100Q5SVJ3 147 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 ELP2Q6IA86 826 aa2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 RWDD4Q6NW29 188 aaKnown RBP2.5□□□□□ -2.01
LSM1P1-201ENST00000438629 TRIM40Q6P9F5 258 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms