RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GNG3P63215 75 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 TNFAIP6P98066 277 aaPredicted RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MZT1Q08AG7 82 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPCS2Q15005 226 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 CEACAM21Q3KPI0 293 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 FOXB2Q5VYV0 432 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF529Q6P280 563 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 C20orf204Q6ZNR8 217 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 LRRTM1Q86UE6 522 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF611Q8N823 705 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 SPERTQ8NA61 448 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR52N4Q8NGI2 321 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR5D18Q8NGL1 313 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 HPSE2Q8WWQ2 592 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR5P3Q8WZ94 311 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 MARVELD3Q96A59 401 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 RFT1Q96AA3 541 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 DGCR14Q96DF8 476 aaKnown RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 ITPKCQ96DU7 683 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 BORCS8Q96FH0 119 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 GPER1Q99527 375 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 NKX3-1Q99801 234 aaPredicted RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 DCUN1D5Q9BTE7 237 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 CXXC4Q9H2H0 198 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 CBLN4Q9NTU7 201 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 C14orf119Q9NWQ9 140 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 LAMP3Q9UQV4 416 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 AK6Q9Y3D8 172 aaKnown RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
HMGA1P4-201ENST00000428643 HCFC1P51610 2035 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 PQLC2LA1A4F0 135 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 A6NLC8 198 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM210A6NLX4 147 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 C17orf100A8MU93 164 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 IL1AP01583 271 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGHV1-46P01743 117 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 GRPP07492 148 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 ADRA2CP18825 462 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 SSTR2P30874 369 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 THBS2P35442 1172 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 SOX6P35712 828 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF93P35789 620 aaPredicted RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 SRP9P49458 86 aaKnown RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 RBP2P50120 134 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 FUT6P51993 359 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 ATP1B3P54709 279 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 CAV3P56539 151 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 HNRNPA0Q13151 305 aaKnown RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 KISS1Q15726 138 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 RAB11BQ15907 218 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 MST1LQ2TV78 715 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 PCGF3Q3KNV8 242 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 GLT8D1Q68CQ7 371 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 LHFPL2Q6ZUX7 228 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 DTX2Q86UW9 622 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 TPRA1Q86W33 373 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF573Q86YE8 665 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 PNLDC1Q8NA58 520 aaKnown RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR5A2Q8NGI9 324 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 TNFAIP8L1Q8WVP5 186 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 C14orf79Q96F83 325 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 VRK1Q99986 396 aaPredicted RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 FGF23Q9GZV9 251 aaPredicted RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 MS4A5Q9H3V2 200 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 METTL17Q9H7H0 456 aaPredicted RBP6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 DECR2Q9NUI1 292 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 DAPK2Q9UIK4 370 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZDHHC8Q9ULC8 765 aa6.73□□□□□ -1.33
HMGA1P4-201ENST00000428643 IGKV1-27A0A075B6S5 117 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 A0A1B0GWJ7 208 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 hCG_1807616A0A1W2PRN6 198 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 FAM221AA4D161 298 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 LRP5LA4QPB2 252 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 IFITM5A6NNB3 132 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 NOTOA8MTQ0 251 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ALX3O95076 343 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CYB5AP00167 134 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ALDOBP05062 364 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 TMEM225BP0DP42 221 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PRF1P14222 555 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 RPS19P39019 145 aaKnown RBP6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 HAAOP46952 286 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 OR3A4PP47883 348 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PPOXP50336 477 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PSMD7P51665 324 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 CCL8P80075 99 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 P2RY14Q15391 338 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 TESK1Q15569 626 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 SWI5Q1ZZU3 235 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 IDNKQ5T6J7 187 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 HES5Q5TA89 166 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 PRAMEF6Q5VXH4 476 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 AWAT2Q6E213 333 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 SFXN4Q6P4A7 337 aa6.72□□□□□ -1.33
HMGA1P4-201ENST00000428643 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms