RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 HPS1Q92902 700 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 FBXO17Q96EF6 278 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 PIK3IP1Q96FE7 263 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 PLPPR2Q96GM1 343 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 MMP28Q9H239 520 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 GPR84Q9NQS5 396 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 B3GNT2Q9NY97 397 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 NLKQ9UBE8 527 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 ATPIF1Q9UII2 106 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RAB22AQ9UL26 194 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RBMX2Q9Y388 322 aaKnown RBP13.49□□□□□ -0.25
SHOX2-202ENST00000425436 TACC2O95359 2948 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
SHOX2-202ENST00000425436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.49□□□□□ -0.25
SHOX2-202ENST00000425436 METTL21EPA6NDL7 271 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 OR6C6A6NF89 314 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 GGT3PA6NGU5 568 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 HMX3A6NHT5 357 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 A6NNC1 897 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 DEFB108AA8MXU0 73 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 F5H5K5 113 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 SULT1C2O00338 296 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 BPNT1O95861 308 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 CELA3BP08861 270 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 CD3GP09693 182 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 GDNFP39905 211 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RAG2P55895 527 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RAB1AP62820 205 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 PP6455Q8WZ26 134 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 RGCCQ9H4X1 137 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 FBLN5Q9UBX5 448 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
SHOX2-202ENST00000425436 TMEM272A0A1B0GTI8 110 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 SYNGR3O43761 229 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 RBBP9O75884 186 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 DHFRP00374 187 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 PRF1P14222 555 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 THBS4P35443 961 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 SLC6A9P48067 706 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 KLF9Q13886 244 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-202ENST00000425436 GSG1Q2KHT4 349 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 PLA1AQ53H76 456 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 MYPOPQ86VE0 399 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-202ENST00000425436 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
SHOX2-202ENST00000425436 HS3ST6Q96QI5 342 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 NGBQ9NPG2 151 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 N6AMT1Q9Y5N5 214 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 ABCA4P78363 2273 aa13.48□□□□□ -0.25
SHOX2-202ENST00000425436 CADP27708 2225 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 FBN2P35556 2912 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 LDLRAD4O15165 306 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 DOK2O60496 412 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 DHRS3O75911 302 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 PLAUP00749 431 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 UBBP0CG47 229 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 CBR1P16152 277 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF32P17041 273 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF93P35789 620 aaPredicted RBP13.47□□□□□ -0.25
SHOX2-202ENST00000425436 GSK3AP49840 483 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 IDH3GP51553 393 aaPredicted RBP13.47□□□□□ -0.25
SHOX2-202ENST00000425436 TLE4Q04727 773 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 KRTAP27-1Q3LI81 207 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 IZUMO1Q8IYV9 350 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 OR51A2Q8NGJ7 313 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 NANOS1Q8WY41 292 aaKnown RBP13.47□□□□□ -0.25
SHOX2-202ENST00000425436 NUDT16L1Q9BRJ7 211 aaKnown RBP13.47□□□□□ -0.25
SHOX2-202ENST00000425436 ATG5Q9H1Y0 275 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 GHRLQ9UBU3 117 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 V9GYS6 101 aa13.47□□□□□ -0.25
SHOX2-202ENST00000425436 RTTNQ86VV8 2226 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 CCNKO75909 580 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 MMP7P09237 267 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 SLC2A1P11166 492 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 LOXP28300 417 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 PRSS3P35030 304 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 RSPO1Q2MKA7 263 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 NCMAPQ5T1S8 102 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 UTS2BQ765I0 119 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 OR52I2Q8NH67 350 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 FAM71F1Q96KD3 344 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 ZNF75AQ96N20 296 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 ESRP2Q9H6T0 727 aaKnown RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 CNTD2Q9H8S5 307 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 393.8 ms